Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00017 ATGGTTTCTAAAGAGCATAGCCACAAGAGAGCAGTGCTGCATGAGAAGCTTCAACTCCTTCGTTCTATTACTGACTCTCATGCTCTAAACCGAACCGCGATCATAATGGATGCCTCGAAGTACATTGCAGAGCTAAAGCAGAAGGTAGAGAGACTAAATCATGACATATCCACTGCGCAGACTTCAAGTGACCAAAATCCCGAACCAAGGGTGACGGTAGAAACCCTAGGAAAGGGATTCCTTGTAGATGTGTTTGCAGCGAGGAGTTGCCCGGGTCTGCTGGTATCCATATTGGAAGCCTTTGAAGGGATGGGTTTGAATGTGCTGGAAGCTAGGGTTTCTTGTACAGACACTTTCCGATTTCAAGCGGTTGGAGGAGAAGAGGAAGAAGGGTTGAATATGGATGAAGAGGCAGTCAAACAAGCAGTGGGACAGGCGATAGAGAAATGGAGAGGAAGTAGCAGTGATGAACAGTGA 477 0.4696 MVSKEHSHKRAVLHEKLQLLRSITDSHALNRTAIIMDASKYIAELKQKVERLNHDISTAQTSSDQNPEPRVTVETLGKGFLVDVFAARSCPGLLVSILEAFEGMGLNVLEARVSCTDTFRFQAVGGEEEEGLNMDEEAVKQAVGQAIEKWRGSSSDEQ 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00017 158 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 148 - -
Pral5892g00017 158 Coils Coil 35 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00017 Pral-Chr5892 60539 62217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00017 13 143 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 29.655 3.80e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00017 - - tcc:18600910 210.305