Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5892g00016 ATGGCGCCGGCGGCCGGGGTAAACGTCCCCCTACTGCCGGAAGGGAAGGGAGCTGCCAAACCAGCATCGGTCACCGGCGCTGTGTTCAACGTCGCTACCACCATAGTAGGCGCTGGAATCATGTCCATTCCGGCGACTGTAAAGGTTGTGGGTGTTATTCCGGCTTTCTTAATGATTTTGATAATTGCTATGCTTGCTGAGGTGTCTGTGGATTTTCTATTGCGCTTTACTCATTCCGGTGAGACGACAACATACTCAGGCGTGATGAAGGAGGCATTCGGGCCAGCGGGCGCAGCAGCCACGCAAATTCTTGTCATAATTACCAATTATGGAGCCTTAATTATGTACCTGATTATTATTGGGGATGTGCTCTGTGGAAAAGGTGAGGCGCACCTGGGCATTTTGCAACAGTGGTTTGGAATTCACTGGTGGAACTGTCGGGAACTTGCTCTGCTTGTCACCTTAGTCTGTGTTATGCTTCCACTGGTCTTGTTCAGACGAGTAGAGCCTTTAAAGTTCAGTTCTGCAATATCTACTCTTCTAGCGGTGGCGTTCGTTGGTATATGTTCTGGGATGGCAGTAGCTGCTCTCTTCGCAGGCAAAACACATATTCCAAGACTCATTCCACACTTGGACCAGCAGATCACTTTCTTTGATCTGTTTACAGCTGTTCCCGTCATAGTCACAGCTTTTACATTTCATTTTAATGTACATCCGATTGCTTTTGAGCTTGCAAAGCCATCTGACATGATGACAGCAGTTCGAATAGCGATAGTGCTTTGCGCAGTCATCTACTTCTCAGTTGGCCTATTTGGGTACCTCTTATTTGGGGATTCAATCAAGTCAGACATTCTTATCAATTTCGATCAGAATGCCGAGTCCACAGTCGGTTCGATGCTCAATAATGTGGTCCGGCTAAGCTATGCGTTTCACATTATGCTAGTGTTCCCTCTCCTGAATTTCTCATTGAGAACCAACATAGATGAGCTCCTCTTCCCCAAGATGTCTCAGCTAGCTACTGACAACAAGAGATTTATGGCCATCACTCTGGTGTTGCTGGTCTCCAGCTATCTTGCTGCTATAGCAATCCCAGATATTTGGTTCTTCTTTCAGTTCATGGGATCTACATCTGCGTTATGCCTCGCCTTTATTTTCCCCGGTGCTATTGCCCTGAGGGATGTCCAAGGTATATCGACAAGAGGGGACAAAATCATCGCACTGATAATGATTATCCTGGCCGCAGTGACTAGTGCGGTTGCCATTTCCACCAACGTATATAATTCCCTTCACTAG 1293 0.4702 MAPAAGVNVPLLPEGKGAAKPASVTGAVFNVATTIVGAGIMSIPATVKVVGVIPAFLMILIIAMLAEVSVDFLLRFTHSGETTTYSGVMKEAFGPAGAAATQILVIITNYGALIMYLIIIGDVLCGKGEAHLGILQQWFGIHWWNCRELALLVTLVCVMLPLVLFRRVEPLKFSSAISTLLAVAFVGICSGMAVAALFAGKTHIPRLIPHLDQQITFFDLFTAVPVIVTAFTFHFNVHPIAFELAKPSDMMTAVRIAIVLCAVIYFSVGLFGYLLFGDSIKSDILINFDQNAESTVGSMLNNVVRLSYAFHIMLVFPLLNFSLRTNIDELLFPKMSQLATDNKRFMAITLVLLVSSYLAAIAIPDIWFFFQFMGSTSALCLAFIFPGAIALRDVQGISTRGDKIIALIMIILAAVTSAVAISTNVYNSLH 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5892g00016 430 PANTHER AMINO ACID TRANSPORTER 18 416 - -
Pral5892g00016 430 Pfam Transmembrane amino acid transporter protein 21 420 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5892g00016 Pral-Chr5892 52192 55314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5892g00016 7 427 Amino Acid or Auxin Permease AAAP Family AT3G56200 56.909 8.72e-171 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5892g00016 - - gmx:100815694 657.136