Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5885g00002 TTGCTGGGAAACACTCTTAATGATTGGTTTCCCATCGTCGGTAATGGAAACTGCTTAAAGCCTTATCCTGAATTGCATATCTCTTTAAAGTTTTTGGCCGTGGGGGACAAGAATCGGACAAGTTATTTTGGTGTTCCTAATACATATTTCCCTCTCCGAAAAGGAGGGAGTGTGACTCTTTATCAAGATGCACATGTACCAAATGGTATGCTACCCGAAATTCCACTTGAGGGGGGAAAGGTCTTTAACCAGGGTAGATGTTGGGAGGATATATGCCATGCCATTTTGGAAGCTCACCATTTAATATATATCATTGGGTGGTCTATTTACCACCCTATAAAGCTCGTCAGAGAACCAACAAAACCGATACCTGCTGGTGGAGAGCTTTCACTTGGAGAATTGTTGAAATACAAATCACAAGAAGGAGTCCGCGTGGTTATCTTGATTTGGGACGACAGAACATCACATGACACCTTTGAAGGTGTCATGCAGACACATGATGAAGCAACCAAAAAATTCTTTAAACACTCCACTGTCCATTGCGTGCTATCTCCACGTTATCCAAGCAATAAACTCAGTATTTTCAAGCAACATGTTGTGGGAACTCTTTTTACACATCATCAGAAGTGCGTGCTTCTTGACACTCAAGCTTCTGGGAATAATAGGAAAATAACTGCTTTTATTGGTGGCCTTGATCTATGTGACGGCAGATATGATACCCCTGAGCACCGGCTTTTCACTGATCTTGATACTGTCTTTAGAGATGATTTCCATAATCCTATACTTTCGCTTTCCAGCTGTACTAGTGGACCAAGAGAGCCATGGCATGACTTGCATTGCAAAGTTGAGGGCCCAGCTGCATATGATATATTAACTAATTTTGAGCAAAGATGGAGGAAAGCCAAAAAATGGCGTAACTTAAGGCTAAACAAGGTTACAAATTGGTATGATGATGCTTTACTAAGGCTAGATCGAATATCATGGATTGTCACACCAGCTATTGGTGTGGGTGATGACACAAGTGTCTATGTAACTGAAGAAAACGATCCTGAGACTTGGAATGTGCAGGTATTTCGGTCCATAGATTCAGGATCTGTCAAGGGTTTTCCAAAGGATGCTATGGAAGCTAAGGCTCAGAATCTTATCTGCGGAAAAAATTTGAAAGTTGACAAAAGCATTCATGCTGCTTATGTATATGCAATAAGATCAGCTCAACGCTTCATATATATAGAGAATCAATATTTTCTTGGATCCTCGTTTCATTGGCCTACCTACAAAACTGCAGGTGCACATAACTTGGTTCCTATGGAGTTGGCTTTGAAAATTGCCAGCAAGATCAGTGCCAGAGAACGTTTTGCTGTGTATATAGTAATCCCCATGTGGCCAGAAGGGGTTCCATCTAGTGCTGCTGTACAGGAAATCTTGTTCTGGCAGGGGCAGACAATGTCTATGATGTACAGGATTGTTGCAGATGCCCTTCAAAAGGCAGGTCTCGCTGACCGTTCTCACCCACAAGATTATCTCAACTTTTATTGCCTCGGAAAGCGTGAGCCTCAAATATCTCAAAGTCCATCACCGGATTTTCAATCAGCTGAAAACCGTACTTTGACATCGGTGAAAAAATTCAGACGGTTTATGATCTATGTTCATGCCAAAGGAATGATAATTGATGATGAGTACGTCCTCATTGGATCTGCAAATATTAACGAGAGATCTTTGGATGGTTCAAGGGATACAGAAATCGCAATGGGTGCTTATCAACCAAAATACACAAAGAAAGCAAAGAAGGCTCGCCCACATGGCCAGGTGTATGGTTACCGAATGTCATTGTGGGCTGAGCATCTGGGTAGTGTTGAAGATACTCTTGATGAACCAGAGAGCCTGCAATGTGTGAGATATGTCAACAATGTTGCCAAAAGGAACTGGTCTGCATATGTGTCCGACGATGCAGGGATCATGTGGGGACACTTGATGCAGTATCCAGTTCAAATCAGTGCAGACGGGACGGTCACTGCACTTCCAGATCATGAGACCTTTCCTGATGTTGGTGGTAAAATTCTTGGATCCCCCAACTCTCTTCCTGATCAACTAACCACGTGA 2100 0.4252 LLGNTLNDWFPIVGNGNCLKPYPELHISLKFLAVGDKNRTSYFGVPNTYFPLRKGGSVTLYQDAHVPNGMLPEIPLEGGKVFNQGRCWEDICHAILEAHHLIYIIGWSIYHPIKLVREPTKPIPAGGELSLGELLKYKSQEGVRVVILIWDDRTSHDTFEGVMQTHDEATKKFFKHSTVHCVLSPRYPSNKLSIFKQHVVGTLFTHHQKCVLLDTQASGNNRKITAFIGGLDLCDGRYDTPEHRLFTDLDTVFRDDFHNPILSLSSCTSGPREPWHDLHCKVEGPAAYDILTNFEQRWRKAKKWRNLRLNKVTNWYDDALLRLDRISWIVTPAIGVGDDTSVYVTEENDPETWNVQVFRSIDSGSVKGFPKDAMEAKAQNLICGKNLKVDKSIHAAYVYAIRSAQRFIYIENQYFLGSSFHWPTYKTAGAHNLVPMELALKIASKISARERFAVYIVIPMWPEGVPSSAAVQEILFWQGQTMSMMYRIVADALQKAGLADRSHPQDYLNFYCLGKREPQISQSPSPDFQSAENRTLTSVKKFRRFMIYVHAKGMIIDDEYVLIGSANINERSLDGSRDTEIAMGAYQPKYTKKAKKARPHGQVYGYRMSLWAEHLGSVEDTLDEPESLQCVRYVNNVAKRNWSAYVSDDAGIMWGHLMQYPVQISADGTVTALPDHETFPDVGGKILGSPNSLPDQLTT 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5885g00002 699 Gene3D Endonuclease Chain A 330 601 - -
Pral5885g00002 699 FunFam Phospholipase D delta 78 319 - -
Pral5885g00002 699 SUPERFAMILY Phospholipase D/nuclease 45 308 - -
Pral5885g00002 699 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 202 237 IPR001736 GO:0003824
Pral5885g00002 699 Pfam PLD-like domain 401 594 IPR025202 -
Pral5885g00002 699 Pfam Phospholipase D C terminal 619 689 IPR024632 -
Pral5885g00002 699 SUPERFAMILY Phospholipase D/nuclease 393 629 - -
Pral5885g00002 699 Pfam Phospholipase D Active site motif 203 237 IPR001736 GO:0003824
Pral5885g00002 699 PIRSF PLD_plant 1 699 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pral5885g00002 699 SMART pld_4 545 572 IPR001736 GO:0003824
Pral5885g00002 699 SMART pld_4 202 237 IPR001736 GO:0003824
Pral5885g00002 699 PANTHER PHOSPHOLIPASE D 4 688 IPR015679 -
Pral5885g00002 699 Gene3D Endonuclease Chain A 79 319 - -
Pral5885g00002 699 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 545 572 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5885g00002 Pral-Chr5885 27710 36094 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5885g00002 3 698 Phospholipase D Gene Family (Wang group) AT4G11850 54.875 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5885g00002 K01115 - gmx:100779740 1150.19