Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5884g00005 ATGGAGAAGTACGAGCTGGTGAAGGATATAGGATCTGGGAATTTCGGGGTGGCCAGGCTTATGCGCAACAAAGAGACCAAGGAGCTCGTTGCCATGAAGTACATTGAACGAGGTCTCAAGATCGATGCAAATGTGGCCAGGGAAATTATAAACCATAGATCTCTTCGCCATCCGAACATTATTCGGTTCAAGGAGGTGGTACTGACTCCCACACATCTCGCAATAGTCATGGAGTATGCTGCAGGTGGGGAGCTCTTTGAGCGAATATGCAATGCTGGAAGATTCAGTGAAGATGAGGCTAGGTACTTCTTCCAGCAGCTCATCTCAGGAGTTAACTACTGTCATTCCATGCAAATTTGCCATCGAGACTTAAAGCTAGAGAACACCTTATTGGATGGCAGCCCAGCTCCGCGTCTGAAAATTTGTGATTTTGGCTACTCTAAGTCATCTCTGCTTCATTCGAGACCTAAATCAACTGTTGGAACTCCAGCCTACATTGCACCAGAGGTTCTTTCACGTAGAGAATATGATGGAAAGTTGGCAGATGTATGGTCCTGTGGAGTAACTCTTTATGTAATGCTGGTGGGAGCTTACCCGTTTGAAGACCAAGAGGATCCGAGAAACTTCAGGAAAACCATAAATCGAATTATGTCAGTTCAATACAAGATCCCGGACTATGTTCACATCTCTCAAGACTGTAGGCACCTGCTATCTCGCATTTTTGTGGCGAATCCAGCAAGGAGAATTACCATCAAGGAGATCAAGTCCCACCCATGGTTTCTAAAGAACTTGCCCAGGGAACTGACAGAAGTGGCTCAAGCTGTTTACTACAGGAAAGGAAACCCAACCTTTTCACTTCAGAGTGTAGATGACATCATGAAAATCGTTGAGGAGGCTAAAACTCCTGCCCAAGTTTCGAGGTCAGTAGGTGGATTTGGCTGGGGAGGAGAGGAAGAGGAAGAGGAGGAAGAAGAAACAAAAGATAGGGTTGCTGTCGAGGAGGTGGAGGAAGAAGATGAATATGAAAAGAGAGTCAAGGAGGCACAGGCTAGTGGTGAATTTAATGTCAGTTAA 1074 0.4562 MEKYELVKDIGSGNFGVARLMRNKETKELVAMKYIERGLKIDANVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFERICNAGRFSEDEARYFFQQLISGVNYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPRNFRKTINRIMSVQYKIPDYVHISQDCRHLLSRIFVANPARRITIKEIKSHPWFLKNLPRELTEVAQAVYYRKGNPTFSLQSVDDIMKIVEEAKTPAQVSRSVGGFGWGGEEEEEEEEETKDRVAVEEVEEEDEYEKRVKEAQASGEFNVS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5884g00005 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Pral5884g00005 357 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5884g00005 357 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5884g00005 357 PANTHER SERINE/THREONINE KINASE 2 304 - -
Pral5884g00005 357 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Pral5884g00005 357 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Pral5884g00005 357 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5884g00005 357 MobiDBLite consensus disorder prediction 315 338 - -
Pral5884g00005 357 CDD STKc_SnRK2 3 259 - -
Pral5884g00005 357 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Pral5884g00005 357 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Pral5884g00005 357 SUPERFAMILY Protein kinase-like (PK-like) 2 289 IPR011009 -
Pral5884g00005 357 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Pral5884g00005 357 Coils Coil 331 351 - -
Pral5884g00005 357 MobiDBLite consensus disorder prediction 307 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5884g00005 Pral-Chr5884 39247 43906 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5884g00005 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 44.074 3.82e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pral5884g00005 Pkinase 8.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5884g00005 K14498 - rcu:8267034 621.698