Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5879g00002 ATGGCAGAGATCGTGATCTCAATCGTGTCAAAGGTTGCAGAATACTTGGTGGTTCCGATTTCACATGGAGCTGCGTATTTTTTCTGCTTTAAGCAACTTAATGAAGACTTCGAGAAAGCAAAAGAAGAGCTAGAGGTGAAACTAGAAGATGTGAGAAAGCGTACGGAAGAAGCAGATCGAAAAACTGAAGAAATAATGCCATCCGTGAAGAAGTGGTTAGATGATGTGAATGCTATCCTAGAGGAGGTACAAAAGCTGCAACAAGAGCTTGATCGAGGACGAAACTATTGTTTCAATGTGTCAGTTAGATACTCATTATCCAAACAAATGGAAAATAAGGCTAAACAGATGATGGACCTCAAACAAAATTCTGACTTTCAGCCATTTTCCCAGGTGATCCAACTTCCTGGAATTACCTACTTCTCTTCCAAAGAGTTTGTGGATTTCAACTCAAGGAAATCAACTTGTAATTGTCTTTTGGAGGCAATTAAAGATGGCACGAACAAGATGGTGGGATTATATGGTATGGCAGGATCAGGCAAAACGACTTTGGCAAAGGAAGTAGGCAAGAAAGTAGATGAGCTAAAGCTTTTTGACAAGGTCATCATGGTAGTCGTTTCAAAACCCCCAAATGTTTTGAACATTCAGCAGGAAATAGCGGGGCAAATAGGCTTACAACTTCAAGAGCCAACTCAACTTACTCAAGCACAAAGGCTATCAAAAGGATTGAAAAATAAGAAGATTCTTATAATCCTAGATGATGTGTGGAGCAAACTAAGGCTTGAAGATATTGGAATTCCATTAAATGAAGGTTGTTGTGTATTGTTGACCACTCGCCTCCATGATGTATGTGTTTCTATGGATTGTGAAAGTATTATTAAATTGTCTCTCTTAATAGAGGAAGAGTCATGGGCATTGTTCAAGATGTGCGTTAAAACAGCCAATGTGTCAATGAATGAGTTTGATAGCATTGGAAGGCAAATTGTTGATGAGTGTAAAGGTTTGCCTATTGCAATTGTGACAGTTGGAAGCACATTAAAAGGAAAGAGTATTCAAGCGTGGAAGTCAACACTAAGGAGGCTACAACGTCCCCTACCATTGGATATTGAAGATGATTTGAAGACCCCTTATGCATGTGTTGAATTAAGTTATGATAATTTGCCAAGTTCACTAGCCAAGTCGCTCTTCATATTGTGTTCTATGTTTCCTGAGGATCATGAAATCCATATAGAGGATTTAATTCGTTTTGGCAACAGGACTCTAAATCTGGGTGATGATATTCATACAATAGGGGAAGCAAGGAATGAGATTTTTGCAACTATTGAGAAATTGTTAGATTCTTGTTTGTTAATGAATACCGATTGGCAGGAACGTGTAAAATTGCATGATGTTGTTCGAGATGTAGCCTTATGGATCGCAAAGAAGCAACATCAAGAAGTTTTGGTGGATAGCCATTCAATTTCAAGCATGCTGGTTAGCAACTGCCGCAGATTGAATGATGCGAAGGCACTCTCATTGTGGAATTTGGATGAGAATTTCAAGATCTTTAATAAATTGCATTGCCCATCACTGGAGATTTTGCTACTTCAACCTGATGGGTTCATTGAAGATATTGGAGCAATAGAAACACTTAAAGTGTTGGCACTCATAACAGATGGCTTTCAACGCAGATTTTGGTCATTAACTTTTCGGTCATCAACTTTTTGCTCTATCCCACAATCAATTGTACTGTTAACAAATCTTCAAACCTTATGTCTTAGAGGGAAACGATTGGGTGACATCTCTTTTTTGTGTGAACTCAAAGGATTGGAGATTCTTGATTTGCGTGGTTCTCTATTTAATGAATTACCTGCTGAAATTGCAGACATGAAAATGCTGAAACTTTTAGATATATTTGAATGTGAAATTAAGGAAAGCCCTTTAGAAGTAATTGGAAGATGTGAGCAGCTTGAAGAATTATACTTTTGGGATAAGAAATCTATCATCCCTGAGAATTTCTCTCTTTCAAGGTTGAAGAGGTATGTCATCTATGATTCCACATGCAGAATGATTAATGAATATTTAGGTTACTCTTTCCAAGAATATTTGGATAGTTGTGATGAAGCATTAAGAGCTTTATGCATACAAGGCTTCAGAATCTTTGCTTTGACTTCGTCAATGAAGGATCTCATTTTTCGGGCAAACCACCTTTGGTTAGATAATTGTTCATGGAATCATAAAGATATAAATTTTAGGATAAAGCACCTCGTGGTATCATTCTGTCAAGAGAAAAGATTCATCATTGAGGACTCTGATATGAACACTCTTCAACCACAACAAATCTTCTCAGACTTGATAACTTTACGATTGTTTGAAATGAATAGTCTTGAACAGCTGTTTGAAGCTTCATCTATCAGCTACTCTCTCCCCATGTTACAAGAGCTGTCGATACAAAGTTGTCCTGAATTGAGAACTTGCATATTCCCCCATGCCATGGTTACGAGCTTGCCAAAGTTGAGGAGACTTGTTATTGAGGGTTGCGGCAAAGTGAAATGGTTATTCTCTTATTCTTTGGCTTCTCATTGTCCGTCCTTGGAGGGGATAATTATAGCCAATTGCTTTGAGCTTGATAGGCTCATTGATGAAGAAGCTGCACTTGGGGATCCATTACTTCATGACATGCAATACTGTCATCCACATGTAATTAATTTGACCAGATTGCTTATGTGGGGTGCCATATGGTATGACAACTCATCGTCCCTCTCTTCCTCTCTTCCACATCATGGGATAAGCTTGCGTTTTGATAAGGGGAGGTTTGGAATTGGGGTTGTGATACTTGAGGCGGTGGGAGTTGTTTCGAGTAGCAAAGGAGGAGAGTACTCAGGGTCTCAAATAGATCTGACGAGTGTTTGTGGGGGGGAGAGAGGGAGAGATAATGGTGCCAATGTAGATGATGAAGACGATGAGATGGTTTCACTCAAAAAAAAAAAAAGGATGATGAGATGGAGGGTGAAGTGGAAGAGAGGAAAGACTGATGACATGGCATGCCACATGAGCAATCTGGTCAAACTAACTGTCAAAATTAACTGGAATAACGGTTAG 3081 0.3888 MAEIVISIVSKVAEYLVVPISHGAAYFFCFKQLNEDFEKAKEELEVKLEDVRKRTEEADRKTEEIMPSVKKWLDDVNAILEEVQKLQQELDRGRNYCFNVSVRYSLSKQMENKAKQMMDLKQNSDFQPFSQVIQLPGITYFSSKEFVDFNSRKSTCNCLLEAIKDGTNKMVGLYGMAGSGKTTLAKEVGKKVDELKLFDKVIMVVVSKPPNVLNIQQEIAGQIGLQLQEPTQLTQAQRLSKGLKNKKILIILDDVWSKLRLEDIGIPLNEGCCVLLTTRLHDVCVSMDCESIIKLSLLIEEESWALFKMCVKTANVSMNEFDSIGRQIVDECKGLPIAIVTVGSTLKGKSIQAWKSTLRRLQRPLPLDIEDDLKTPYACVELSYDNLPSSLAKSLFILCSMFPEDHEIHIEDLIRFGNRTLNLGDDIHTIGEARNEIFATIEKLLDSCLLMNTDWQERVKLHDVVRDVALWIAKKQHQEVLVDSHSISSMLVSNCRRLNDAKALSLWNLDENFKIFNKLHCPSLEILLLQPDGFIEDIGAIETLKVLALITDGFQRRFWSLTFRSSTFCSIPQSIVLLTNLQTLCLRGKRLGDISFLCELKGLEILDLRGSLFNELPAEIADMKMLKLLDIFECEIKESPLEVIGRCEQLEELYFWDKKSIIPENFSLSRLKRYVIYDSTCRMINEYLGYSFQEYLDSCDEALRALCIQGFRIFALTSSMKDLIFRANHLWLDNCSWNHKDINFRIKHLVVSFCQEKRFIIEDSDMNTLQPQQIFSDLITLRLFEMNSLEQLFEASSISYSLPMLQELSIQSCPELRTCIFPHAMVTSLPKLRRLVIEGCGKVKWLFSYSLASHCPSLEGIIIANCFELDRLIDEEAALGDPLLHDMQYCHPHVINLTRLLMWGAIWYDNSSSLSSSLPHHGISLRFDKGRFGIGVVILEAVGVVSSSKGGEYSGSQIDLTSVCGGERGRDNGANVDDEDDEMVSLKKKKRMMRWRVKWKRGKTDDMACHMSNLVKLTVKINWNNG 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5879g00002 1026 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 32 873 - -
Pral5879g00002 1026 SUPERFAMILY L domain-like 461 873 - -
Pral5879g00002 1026 PRINTS Disease resistance protein signature 242 256 - -
Pral5879g00002 1026 PRINTS Disease resistance protein signature 332 346 - -
Pral5879g00002 1026 PRINTS Disease resistance protein signature 621 637 - -
Pral5879g00002 1026 PRINTS Disease resistance protein signature 170 185 - -
Pral5879g00002 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 399 IPR027417 -
Pral5879g00002 1026 Gene3D Ribonuclease Inhibitor 700 879 IPR032675 -
Pral5879g00002 1026 FunFam Probable disease resistance protein At1g61300 142 291 - -
Pral5879g00002 1026 Coils Coil 30 61 - -
Pral5879g00002 1026 Pfam NB-ARC domain 165 386 IPR002182 GO:0043531
Pral5879g00002 1026 Gene3D - 141 294 IPR027417 -
Pral5879g00002 1026 SMART AAA_5 167 297 IPR003593 GO:0016887
Pral5879g00002 1026 Gene3D Ribonuclease Inhibitor 489 686 IPR032675 -
Pral5879g00002 1026 Gene3D - 298 380 IPR042197 -
Pral5879g00002 1026 Coils Coil 69 96 - -
Pral5879g00002 1026 Gene3D - 381 470 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5879g00002 Pral-Chr5879 16818 21181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5879g00002 169 480 WRKY Transcription Factor Family AT5G45050 22.840 1.62e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5879g00002 - - pcin:129306241 1067.76