Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5877g00007 ATGAACTCAACAGTGCCCCGATGGAAGTACCATGTGTTCTTGAGCTTCAGGGGAGAAGACACCCGCAATAGCTTCACAGGTCACTTACATGCTGCTCTTGAACGAAGAGGTATCATAACTTTCATAGATGATGAACTCAGGAAAGGAGAAGATATCTCCCAAGAACTCCTCCAAGCCATTGAAGAATCTCTTGTCTCCATTGTTATTCTTTCCCCAAACTATGCATCTTCTCGTTGGTGTTTGGCTGAACTCCAAAAGATTCTTGAATCCAAGCGATCTTTGGGAAGAGAAGTGGTTCCGGTGTTCTTTAACATAGATCCATCTCATGTGAGACGTCTAAGAGGTGCCATTGGAGATGCCTTTAAAAGCCACAGGGAGAGATTTGCTGACAAGGTCCAAGGATGGAGAGATGCTTTGCGTGAAGCTGCAAATATATCTGGCTACGACTGCAACCACCGGCATGAAGCAAAACTCATTGAAGAAATTACAGCAGAAGTATGGGCAAAGGTACACCCTAAATTACCATATTGTTGCAACAATGAGCTCATCGGCATCGAATCGAGAGTGGAAGAAGTGAATTCACTTTTAAAGATTGGATTTTGTGATGTTCGCTTAATAGGAATATGGGGAATGCCAGGTATTGGAAAGACAACTCTTGCGAGAGTTGTCTATGATAGAATTTTTCGCCAATTTGACCTCAGTTGTTTTCTTGCTGATGTGAAAGAAAGCTCTGAAGCCAAGGGCTTGGTTGCTTTGCAAAGGAAACTTCTCTCCAAACTCAAGATAAAAGGCATAGAAGTTGATGATTCACATGATGGAAAGAATATAATAAGAAACCTGCTATGCAACAAAAAAGTTCTAGTTGTCTTGGATGATATAAATGAAATAAACCAACTAGAGGACCTTTGTATAAGGCAGGGTTGGCTGGGTCCTGGGAGCAGAGCAATTGTGACGACTAAAAATATGCATGTATTGATAGAGCATGGAGAATTTGAAATTTATAAGGCTGAATTGTTAAACAATGATGAGTCTCTACAGCTCTTTTGTGAGAATGCTTTTAAAAGGGATCAACCTCTAGAAGGTTATTGGAAGTTGTGTGAAGACGTCATCCACCATGCTCAAGGCCTTCCTTTAACTCTTGAAGTGTTGGGTTCATATTTTTGTGGAAGAAGTGAACTTGAATGGAAAGAAGGTTTGGAGAAAATCAAGAAGTCTCCACCAAGCAATATTCTAAAGAGGCTTAGAATCAGTTATAATGCATTAAGTGATACGGAGAAGAAAATATTTTTAGATGTTGCTTGTTGTTTTAAAGGAATGGTCAAAGACCAAGTGACAGAAATATTTGAAATATGTGGTGATCTTTATCCAACACTTGGAATAAGAGAACTTGTTGAGAAATGCTTGTTGACAGAAAATCATAGTAATGATGGTGCATGTTATCTGGGTATGCACGATATCCTTCAAAAAATGGGCAGAAGTATTGTTATAGAGGAATCGCGTAAAGATGTTGGCAGACGTAGCAGGCTATGGTCGCTGGAAGATATTGATCATGTGATGACAAAAAACAAAGGCACTGATTTGGTTGAACTTATACATCTTCAATCACCTATGCCATATGAAGCGAATTGGGACCCTGAAGCATTCTCTATGATGCGGAGCCTCACAATACTCATCATATTATGTGATGTGTACCTTCCTCGAGGTCTCAAATTTCTTCCCAGTTCATTAAAAATTCTTGAGTGGAAAGCTTATCCTTTGAATTCTTTGCCCTGTGTTGCCCATCTTGATGAACTTGTGCTCCTGAAAACGCATCATAGCAAGATCATACAACTTCGTTGGGGGAGAACACAAATGTCAAAAAAGTTGAAGTTTATTGATTTAAGCTACTCAGAAGAATTCACAAGAACGCCTGATTTCTCGATGCTGCCCAATCTTGAGCAACTAATTCTTAAAGGTTGCGTTAAACTTTCTGGAGTCCACCCATCACTTGGACAACATACCAAACTTGTTCTACTGGATTTGAAAGATTGCAAGAATCTTAAAGCTCTTCCGAGTAGAATGGAAATGAATTCACTAAAGACATTGATACTTTCTGGCTGCTTAAAACTTAAAAAGCTTCCAGAATTTGGGAAAAATATGACCAACTTGTTGTCTCTTGAAGTGGAAAATTGTGAAAACATTGTTTGTCTTCCATGTTCCACTTGTAATTTGAAATCCCTGAAAGTTCTCAATATGTTGGGTTGCTCAAAATTTTCCTCATTACCGCAAAATATTGATGAAAATGAGTGTTTAGAGGAGCTTGATTTGAGTAGAACTGCTATAAGAGAAATACCTTTATCGATCGTTAGCCTTCAAAATTTGAAGATGCTATATTTGAATGGATGTAATGGTCTAAGTTCAACATCCAATTCATTAATAAGGAGCTTGCTTTCCCCAGTTCGAAGGGCATTTGGGTATGGTATTCGTGAAGCTCCCACTGGATTGGTTTTTCCTTCTTTCATCGCACGTCTAGCATCACTGAAGAAGTTGATTATGAGAAGTTGCAATCTCGAAGGGGGGTCAATTCCAAATGATCTTGGCTGCTTACCATCATTGGAGGTCATTGATTTTAGTGGGAATGATTTTAGCAACCTACCTGAGGGCAGTTGTGTTCTTCCTCCCTCATTCTCACGTCTTTCCTCATTGAAGTCTTTGGGCTTATCTTCTTGCAATCTCCATGATGGGTCAATTCCTGAGAATCTTAATTGCTTATCATCATTGAAGCAACTTAATCTACATAACAATGAATTTACCCATCTTCCTGCTGGTTGTGTTGCTAATCTTTCACTTCTATCTCATCTTCATTTGAGTTATTGCCGAAAGCTCAAATACTTGCCAGATCTTCCGCCGAATCTAAAGCAGATAGACACAATAGCTTGTCATTCAATGCAACCACTATCTCTTTCAGAATTTCTATCAGTTTTGATTACAACTACTAATGATTTTTCAAAATCTTTTCCATCAACGATTTTGCATAACATGGATTTCAAGGTTTGGTGGACGCTGGAGACTGACATCCCATCTTGGTTCCATAGTCAAAATGTGCAATTTCTTCATGAAGTTGATGGTTTTCAAGATAATCATGTTGTTCAAATTTCCAAGAGAGAAATCTCATGTAAAGATCTTGATCATTATCATCCCAATGTGATTGGTGGTTTTGTACCGTCTGATTCCATTGTGTCAATAAAAGTAGACGTCTGTCATCTTTGTGGTTCAAGTATAAGGTGGGGAATTTCTCTTTGCATTGTTCTGCAAGATCTAGACCTTCCTTTATGTGGTGGAGATGTGTTCTCTCGAATTCTTCAGCTGACTTATAAAGCTTCACAAGATAAATTCTTCAAAAAGGAATTGTCATGGACAATTGCCATGGGAAACAATCCCAATCAAATGCTGATGATTCATTTGCCTGGGAGTAATTTCAGAGTAGTTGACTGTGGCCAGATCGAATTCATCTTTTATACGCAAAAATATAAGTGCACAAAGAAAGTACAAGGGTTTGGGAAAGTTGGTTTGCAAAGTCAGAGTAAATTTGTGATAAGCAAGTGTGGGTGGCGTGTGATAAGCGAGGAAGATGTCGAAGAATGGCGCAGATCATCAGTGAACGTGCGTAGCACTAGTGGTAGTAGTGAAATCCTTTCCGAGCATTCTCTTTATGCTTATGGAAAGAGTACCTGTGAAGTTGAAGAATTGGAAGAAGAAGAAGACAACATTGTGATTAATGAGGAAGCCGAAATATTTTCTGCTAAACGAAGAAGAATCGAATGA 3804 0.3883 MNSTVPRWKYHVFLSFRGEDTRNSFTGHLHAALERRGIITFIDDELRKGEDISQELLQAIEESLVSIVILSPNYASSRWCLAELQKILESKRSLGREVVPVFFNIDPSHVRRLRGAIGDAFKSHRERFADKVQGWRDALREAANISGYDCNHRHEAKLIEEITAEVWAKVHPKLPYCCNNELIGIESRVEEVNSLLKIGFCDVRLIGIWGMPGIGKTTLARVVYDRIFRQFDLSCFLADVKESSEAKGLVALQRKLLSKLKIKGIEVDDSHDGKNIIRNLLCNKKVLVVLDDINEINQLEDLCIRQGWLGPGSRAIVTTKNMHVLIEHGEFEIYKAELLNNDESLQLFCENAFKRDQPLEGYWKLCEDVIHHAQGLPLTLEVLGSYFCGRSELEWKEGLEKIKKSPPSNILKRLRISYNALSDTEKKIFLDVACCFKGMVKDQVTEIFEICGDLYPTLGIRELVEKCLLTENHSNDGACYLGMHDILQKMGRSIVIEESRKDVGRRSRLWSLEDIDHVMTKNKGTDLVELIHLQSPMPYEANWDPEAFSMMRSLTILIILCDVYLPRGLKFLPSSLKILEWKAYPLNSLPCVAHLDELVLLKTHHSKIIQLRWGRTQMSKKLKFIDLSYSEEFTRTPDFSMLPNLEQLILKGCVKLSGVHPSLGQHTKLVLLDLKDCKNLKALPSRMEMNSLKTLILSGCLKLKKLPEFGKNMTNLLSLEVENCENIVCLPCSTCNLKSLKVLNMLGCSKFSSLPQNIDENECLEELDLSRTAIREIPLSIVSLQNLKMLYLNGCNGLSSTSNSLIRSLLSPVRRAFGYGIREAPTGLVFPSFIARLASLKKLIMRSCNLEGGSIPNDLGCLPSLEVIDFSGNDFSNLPEGSCVLPPSFSRLSSLKSLGLSSCNLHDGSIPENLNCLSSLKQLNLHNNEFTHLPAGCVANLSLLSHLHLSYCRKLKYLPDLPPNLKQIDTIACHSMQPLSLSEFLSVLITTTNDFSKSFPSTILHNMDFKVWWTLETDIPSWFHSQNVQFLHEVDGFQDNHVVQISKREISCKDLDHYHPNVIGGFVPSDSIVSIKVDVCHLCGSSIRWGISLCIVLQDLDLPLCGGDVFSRILQLTYKASQDKFFKKELSWTIAMGNNPNQMLMIHLPGSNFRVVDCGQIEFIFYTQKYKCTKKVQGFGKVGLQSQSKFVISKCGWRVISEEDVEEWRRSSVNVRSTSGSSEILSEHSLYAYGKSTCEVEELEEEEDNIVINEEAEIFSAKRRRIE 1267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5877g00007 1267 Gene3D Ribonuclease Inhibitor 542 688 IPR032675 -
Pral5877g00007 1267 SMART till_3 9 145 IPR000157 GO:0007165
Pral5877g00007 1267 Pfam TIR domain 9 184 IPR000157 GO:0007165
Pral5877g00007 1267 Gene3D - 172 330 IPR027417 -
Pral5877g00007 1267 Gene3D Ribonuclease Inhibitor 689 811 IPR032675 -
Pral5877g00007 1267 SUPERFAMILY L domain-like 829 1006 - -
Pral5877g00007 1267 SMART LRR_typ_2 642 666 IPR003591 -
Pral5877g00007 1267 SMART LRR_typ_2 862 885 IPR003591 -
Pral5877g00007 1267 SMART LRR_typ_2 762 784 IPR003591 -
Pral5877g00007 1267 SMART LRR_typ_2 892 916 IPR003591 -
Pral5877g00007 1267 SMART LRR_typ_2 917 940 IPR003591 -
Pral5877g00007 1267 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 431 IPR027417 -
Pral5877g00007 1267 Gene3D - 338 422 IPR042197 -
Pral5877g00007 1267 PRINTS Disease resistance protein signature 280 294 - -
Pral5877g00007 1267 PRINTS Disease resistance protein signature 687 703 - -
Pral5877g00007 1267 PRINTS Disease resistance protein signature 205 220 - -
Pral5877g00007 1267 PRINTS Disease resistance protein signature 373 387 - -
Pral5877g00007 1267 Pfam NB-ARC domain 188 410 IPR002182 GO:0043531
Pral5877g00007 1267 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 148 IPR035897 -
Pral5877g00007 1267 Gene3D - 4 171 IPR035897 -
Pral5877g00007 1267 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 708 IPR044974 GO:0006952
Pral5877g00007 1267 ProSiteProfiles TIR domain profile. 8 170 IPR000157 GO:0007165
Pral5877g00007 1267 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 171 - -
Pral5877g00007 1267 Gene3D Ribonuclease Inhibitor 821 1207 IPR032675 -
Pral5877g00007 1267 SUPERFAMILY L domain-like 483 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5877g00007 Pral-Chr5877 167316 177297 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5877g00007 10 790 WRKY Transcription Factor Family AT4G12020 32.643 5.58e-99 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5877g00007 - - pcin:129317909 1692.17