Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5875g00015 ATGAGTTGGTTTGTGAAAAGTGATGGCCATGGATCATCAAGACGAGGGCAAATAGTGAGCTTGGAGATGGAGGAGCAGAGAGGAGGAGGAGGAGAAGGTATTTTTCTGACATGGGAGGATCTGAAGGTGACAGTGACGACCAATGGGAAAGACAAGTCTAGGCCAATCCTTGAAGGTCTCACTGGTTATGCCAAGCCAGGACAGCTCTTAGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCCACCCTCCTTGACGCCTTAGCAGGTAGGTTGTGTACAAGGGCACAGCAAACAGGAGATATCCTTATCAATGGCCGCAAACAAGGACTGGCTTATGGAACATCAGCATATCTGACGCAAGATGATGCAATATTCACAACCTTAACGGTGGGAGAAGCAGTGCACTACTCAGCTCAATTGCAACTTCCTGATTCAATGACCAAGTCGGAGAAGAGGGAGAGAGCAGACTTCACAATCAGAGAAATGGGTTTACAAGACGCCATTAACACAAGGATTGGAGGTTGTGGAGGTTCTAAAGGAATCAGTGGAGGCCAAAAGAGAAGGGTTAGCATCTGTATTGAGATTCTCACACGGCCTAGCCTTCTGTTCCTTGATGAACCAACCAGTGGACTTGACAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCAAGCTTGAATCAGAAAGATGGAATTCAAAGGACTATTATTGCAGCAATTCATCAGCCTAGCAGTGAGGTTTTTGAGCTTTTTCATAACCTTTGCCTTCTGTCTTCTGGTCAAGCTGTGTACTTTGGCCCTGCTTCTGCTGCAAAGGAGTTTTTTGCATCAAATGGTTTTCCTTGCCCTACTCTCAAGAGCCCCTCTGATCATTTTGTAAAGACTATCAACAATGATTTTGATAAGGAGGACCCAGAGCAAGGATTATCCGAAGGACTAACCACAGAAGAAGCAGTTCATATTCTTGTGGAATCATACAAGTCATCTGCAATCAGTCACCAAGTTCAAGCAGAAGTGGTTACAACAAGAACAAGGAATTCAAGTGCAATGGAGATGAAAAGCCATGCTTCCTTCTTCAAGCAATGCATCATTCTTACAAGAAGATCATTTTGGAATATGCATCGCGATTTAGGCTACTACTGGTTGCGTCTATTTATCTATGGTGGATTGGCTATAACTCTAGGCACTATCTTCTACAATGTTGGCTCAAGCAAAACAACTCAGGTAAGAGGCTCACTGCTCATGTTTGTGGCCACATTTCTGAGTTTCATAACCATTGCTGGGTTCGCTTCCCTTGTGGAGGACATGAAGGTGTTTCAAAGAGAAAGACTAAATGGGCATTATGGTGTTGCTGCATACACAATTGGACACACATTATCTTGCATTCCATTCTTGCTACTAATGTCACTGATTCCAGGAGCAATAATTTATTACCTAACCGGACTTCATAGAGGCTATCAGCATTTTCTCTACTTTGCTTCTGTGCTTTTCATCTCAGTAATGTTGGTTGAGAGCTGCATGATGATTGTTGCAAGCATGCTTCCAAATTTCTTGATGGGGATGATCACCGGTGCTGGAATTCTGGGAGTAATGATGTTAACCGGTGGATTCTATCGCCTACCTGCGGAACTTCCTAAATTCTTATGGAGATATCCTTTTTACTACATTTCAATTCACAGGTATGCATGCCATGGATTGTTCAAGAATGAGTTTGAAGGTCTGACATTTACTATCAGTCAAGAGGGGAGGCCTAGGATCTTTAGTGGGGAAGAAATGCTGAGAAATTCATGGCAGATCGACGTGGAAAACTCGAAGTGGATCGATCTTTTGATTCTGGTAGGAATGGCAGTTCTGTACAGAAGTCTGTTCATGGTTATAGTCAAGATCCTTGAGAAGGTGAAGCCTATAGTTGCATCCTTCAACTTCAAGTGA 1932 0.4337 MSWFVKSDGHGSSRRGQIVSLEMEEQRGGGGEGIFLTWEDLKVTVTTNGKDKSRPILEGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLCTRAQQTGDILINGRKQGLAYGTSAYLTQDDAIFTTLTVGEAVHYSAQLQLPDSMTKSEKRERADFTIREMGLQDAINTRIGGCGGSKGISGGQKRRVSICIEILTRPSLLFLDEPTSGLDSAASYYVMSRIASLNQKDGIQRTIIAAIHQPSSEVFELFHNLCLLSSGQAVYFGPASAAKEFFASNGFPCPTLKSPSDHFVKTINNDFDKEDPEQGLSEGLTTEEAVHILVESYKSSAISHQVQAEVVTTRTRNSSAMEMKSHASFFKQCIILTRRSFWNMHRDLGYYWLRLFIYGGLAITLGTIFYNVGSSKTTQVRGSLLMFVATFLSFITIAGFASLVEDMKVFQRERLNGHYGVAAYTIGHTLSCIPFLLLMSLIPGAIIYYLTGLHRGYQHFLYFASVLFISVMLVESCMMIVASMLPNFLMGMITGAGILGVMMLTGGFYRLPAELPKFLWRYPFYYISIHRYACHGLFKNEFEGLTFTISQEGRPRIFSGEEMLRNSWQIDVENSKWIDLLILVGMAVLYRSLFMVIVKILEKVKPIVASFNFK 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5875g00015 643 FunFam ABC transporter G family member 11 34 325 - -
Pral5875g00015 643 Pfam ABC-2 type transporter 241 345 IPR043926 GO:0140359
Pral5875g00015 643 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 32 639 - -
Pral5875g00015 643 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 275 IPR027417 -
Pral5875g00015 643 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 284 IPR003439 GO:0005524
Pral5875g00015 643 SMART AAA_5 66 256 IPR003593 GO:0016887
Pral5875g00015 643 Pfam ABC-2 type transporter 361 571 IPR013525 GO:0016020|GO:0140359
Pral5875g00015 643 Pfam ABC transporter 59 209 IPR003439 GO:0005524
Pral5875g00015 643 Gene3D - 36 278 IPR027417 -
Pral5875g00015 643 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5875g00015 Pral-Chr5875 100961 107096 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5875g00015 53 239 Calmodulin-binding Proteins AT2G36910 29.231 1.88e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5875g00015 K05681 - gmx:100789571 883.634