LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5871g00016	ATGGGTTATTTTCAATTATTTGTTGTTTTACTTTTATCAATTCCTATTGAACTTTGTTTAGCCACCTCCCCCATCGAAGATCAAGAGAGAGATAAGATAACCCATTTACCAGGACAACCAAAAAATGTAGGATTTGCTCAGTACTCTGGTTATGTAACTGTGAACGAGCAAGCAGGGAGGGCGTTATTTTACTGGCTGATCGAGTCGCCTTCAAGTCGTGGCCCCAAGTCCAGGCCACTTGTTTTATGGCTTAATGGTGGTCCTGGATGCTCCTCTATTGCTTACGGTTTGGCTGAAGAGATTGGCCCTTTTCGAATTAGTTCTGATGGGAAGTCACTTTACATGAATCCATATGCTTGGAACAATTTGGCAAATATACTTTTCATTGAGTCTCCTGCTGGTGTGGGTTTTTCATATTCCAATGAAACATCAGATCTGTACTCTGCAGGTGACCAGAGAACAGCTGAAGATGCCTATACATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGTATAGAGATTTTTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCTCAACTTGTTTACCATAAAAATAAGGGTGTCCAGAAACCAATTATAAATTTAAAGGGATTTATGGTTGGAAACGCTGTTACTGATGATTATAACGATTATGTTGGCACATTTGAGTACTGGTGGACCCATGGTTTGATTTCGGATTCCACATATAAGATGCTTCAACTAGCATGTGACTTTGGGTCTTCCCAGCATCCATCAATACAATGCATAGAGGCTCTAAGAGTTGCAGATTTAGAGCGGGGAAACATTGATCCATATAGCATTTATACACGCCCATGCAATGATACTGCATCACTCAAGCGCAGGTTGGGCGGTCGCTATCCATGGATGTCTCGAGCTTACGACCCTTGTACTGAGAGTGATATTGTTGGAAACTACTGGGCCGATTCTCCACTATCTATGCTTCCAATATATCAAGAACTCATTGGTGTTGGTCTCAAGATATGGGTATACAGTGGAGATACGGACTCTGTGGTTCCAGTAACTGCTACTCGATATTCCATTGACGCCTTGAAACTTCCCACCATTACTAATTGGTACCCCTGGTATGATAATGGCAAGGTTGGTGGATGGAGCCAAGTTTATGAAGGGCTTACGTTTGTTACAGTAACAGGAGCTGGACATGAAGTTCCACTACATCGACCTCGCCAAGCATTCATTCTTTTCCGGTCATTCTTGGAGAGCAAGCCCATGACAAGTTAA	1284	0.419	MGYFQLFVVLLLSIPIELCLATSPIEDQERDKITHLPGQPKNVGFAQYSGYVTVNEQAGRALFYWLIESPSSRGPKSRPLVLWLNGGPGCSSIAYGLAEEIGPFRISSDGKSLYMNPYAWNNLANILFIESPAGVGFSYSNETSDLYSAGDQRTAEDAYTFLVNWFERFPQYKYRDFYIAGESYAGHYVPQLAQLVYHKNKGVQKPIINLKGFMVGNAVTDDYNDYVGTFEYWWTHGLISDSTYKMLQLACDFGSSQHPSIQCIEALRVADLERGNIDPYSIYTRPCNDTASLKRRLGGRYPWMSRAYDPCTESDIVGNYWADSPLSMLPIYQELIGVGLKIWVYSGDTDSVVPVTATRYSIDALKLPTITNWYPWYDNGKVGGWSQVYEGLTFVTVTGAGHEVPLHRPRQAFILFRSFLESKPMTS	427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5871g00016	427	ProSitePatterns	Serine carboxypeptidases, serine active site.	179	186	IPR018202	GO:0004185
	Pral5871g00016	427	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	32	409	IPR001563	GO:0004185\|GO:0006508
	Pral5871g00016	427	Gene3D	alpha/beta hydrolase	27	289	IPR029058	-
	Pral5871g00016	427	SUPERFAMILY	alpha/beta-Hydrolases	28	425	IPR029058	-
	Pral5871g00016	427	FunFam	Carboxypeptidase	328	422	-	-
	Pral5871g00016	427	Gene3D	-	328	422	-	-
	Pral5871g00016	427	PRINTS	Carboxypeptidase C serine protease (S10) family signature	129	139	IPR001563	GO:0004185\|GO:0006508
	Pral5871g00016	427	PRINTS	Carboxypeptidase C serine protease (S10) family signature	116	128	IPR001563	GO:0004185\|GO:0006508
	Pral5871g00016	427	PRINTS	Carboxypeptidase C serine protease (S10) family signature	165	190	IPR001563	GO:0004185\|GO:0006508
	Pral5871g00016	427	PRINTS	Carboxypeptidase C serine protease (S10) family signature	392	405	IPR001563	GO:0004185\|GO:0006508
	Pral5871g00016	427	FunFam	Carboxypeptidase	27	289	-	-
	Pral5871g00016	427	ProSitePatterns	Serine carboxypeptidases, histidine active site.	392	409	IPR033124	GO:0004185
	Pral5871g00016	427	Pfam	Serine carboxypeptidase	37	314	IPR001563	GO:0004185\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5871g00016	Pral-Chr5871	59597	64746	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5871g00016	320	425	Calmodulin-binding Proteins	AT2G22960	30.841	1.45e-13	67.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5871g00016	K16297		-	qsa:O6P43_005055	746.503