Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5871g00014 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTGGGCTCTGTGGCGCGATGGAGAGACTCTTCTCATCATGGTTCCCGAGAGTTCAGTCGTTGGGGATCGGCCGATTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTTTTCCGAAGATTCTGGGCATGGATATGCACAATCTCGGTCCAGTGAAAAGATGCTGGAAGAAGAGAACTGTCGTCCATCCGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAAAATAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAGGCCAGCAACGGCTCTCCAAATTTGTCCAGGAGGCCATCGGATGTGACTATTGACCAGAGGTCAGCTGATGACATGCTAACATATCCTTCTCACCATCATTCCGATTTTGTAAATACTTGGGATCAGCATCATATGAAAGACCAGCACGATAAGATGGGTGGTGTCAACGGGTTGGGTAACGCACAGAGATTGGATAGAGAGCATTCTCTTGGTTCAATTGACTGGAAGCCTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCACACAAGTAGCTCAAGGAGTGGAGGGGCAGATTCCAATGAAGCTAAATCTGAATTGCATCCAAAAATTGCAACTCCTATTGAATCCCATTCAGGGGATGGGGCTGCATGTGCGACATCTTCTGCACCCTCTGAAGATATGATATCCAGGAAGAAGCCTCGGTTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAAAAGAAAATTGAGGAACCTGATGCGAGTGCAAGCAAGGATGGGCCTGTCTTGTCTACTAGTAATATTGAACCCTCTAATTTTCTTGGTTCAAATTTACTAGATAAAAGCCCAAAAGTTACAGGTTTTTCAGATTGTGCATCTCCAGCCACTCCATCTTCTGTTGCCTGCAGTTCCTCCCCAGCAGGTGTGGAGGATAAATTGTATGGAAAAGCCGTGAATAGCGACAATGATATTAGTAATTTGAATGGCTTATTGGACCCCGGGCCTCAGAATCATCTACAGACGTTCTCTTTGAATTTAGAGAAGTTGGATATTGATTCCCTTAGTAGTTTGGGTTCTTCACTTATTGGGTTGCTACAATCTGATGACCCAAGTTCTGTGGATCCTAGCGCAGCAAATTCCACTGCAATGAATAAGTTGCTGATATGGAAAGCTGACCTTTCGAAGGTATTGGAGGTTACTGAAGCTGAAATAGATTTACTAGAAAGTGAGTTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGTCGTCCTGCAGCATTGGGCTCCTCAGTGGTGGCAAACAACACAAAGTCTTGTGAAGAACAAGTTAGAGGCTATGATAAGGTCTCCAGGCCTGAGCCATTGCAGGTTTGTTCTTCTGCTGATCCTGATGTTGAGAAGATTTCCCTTTCAACTAAAGTGAATAATATTCATGAAAATGGCAAGGAGGAAGATATTGATAGTCCTGGAACGGCAACTTCTAAATTTGTGGAGCCTCAACCTCTTATGCAAACTGTCTCTTCATGTGATATAGGCGGAAATGATAATTGCTCTGGAGGCTTTGATGCCATTCAATCTGCAAGCAGTAGATGCTTAGTCCCTTGTTCCACTAGTGAGCGAGCTATGGAGATAAAAGATGACATGGGTGCTGCTCCTGGTGCAAGTGCTTGCTCTAGATCTGAGGATATATTGTGTAATGCAATTATTTCTTCTAATAAAGAATATGCAAACAGAGTGTGTGAAGAATTTGCTCAGTTATTGCCAAAAGATTGTTTTAAGATTGGTAACATAAGAGCTATCACTGATTCATGCTCTTCAGCTGCCGCTGTTAGAGAAAAATTTGTAGAGAGAAAGCGGTTAGCAAGGATTAAGGAGCGAGTAATAACCCTAAAGTTTAAAGCCTTGCATCATCAATGGAAAGAAGATATGCGATTACTGTCTGTACGAAAATGCCGCCCAAAATCTCAAAAGAAACTTGAAGCGGGCATTCGAACTACTAATAATGGTTTTCAAAAGAATCGGTCCTCCATTCGTTCTCGGATATCCTACCCTGGAAATAATTTAAGCCTTGTTCCAACATCTGAGATAAATAATTTTGCAAGCAAACTTCTCTCTGATCCCCAAGTTAAAGTTTACCGGAGCGCCTTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAGATGATATTGAGGTTTCCGTGTAGTAATGGGTTGGTTGAAGATCCTTTGGCGTATGAGAAAGAGAGGGCGATGATCAACCCTTGGACATCCGAAGAGAGAGAGATTTTCATGGAGAAATTTGCTGCTTTTGGGAAAGACTTCCGGAAAATTTCTTCTTTTCTTGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGTTTTGACAAAATTAAGAAGGATGTTAGAAAGCTAGGGAAGTCATATTTGACCAACACTGACTTAGTAGCATCAGGAAAGAAATGGAATCGAGAAATAAATGCTGCTTCACTTGAGATTTTGAGTGCAGCTTCAGTGATAGCGGGCCATGCAGACAGAATAAATGGTAATAAGAAATTGCGTTCAGGAAGTTCTCTTTTAGGGGGCTATGGTAATGTGAAAAGATCTAAGGTTGAGGATAGTCTCCTAGAGATGTCAAACAGTTTTGATGCTCTTAGGGACGAGAGAGAGGTAGTTGCGGCTGATGTTTTGGCTGGTATAAGTGGTTCTATATCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCTGTTGATCCTGTAGAGGGTAGCAGGGACAGGAGTTTGAAAATAAACCTTGGGAAAAAGCAGTTGTTGACACCTGATGTTATTCAGAGTGGTGATGATGATTCCTGTTCAGACGAGAGCTGCGAGGAGATGGATCCTGCTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCAGGCTGTGTCATCTTATGGAAAGGACTTTGCTAAGATCTCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTATTCTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTTATGCGGCCCAAGTCTATAAATGCAGGATACCCAGCGAATGATGATGCAAATGGTGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGACAGGTTCGGCAATTGGCCCTGATAGGTCAGGCACTAAAACTGATGAGGACCAGCCAGTGTCTCTCATGAATACATGCTCTGATGAATTTAATTCGGTTGAAGTCAGGGTTTTGTCAACTGATTTGAATAAATCAAATAATATTGGGGCAGAAGGGGTTCAAGATGGTGATGGTGTGGATGATATGGTTTCTGATGCTTGTGAAATGGATGAAAAGCCTAAACTGTGCTATGATGATGGTGGGGATGTCTTGTACAGTTCTGACAAGTCTGCTGCTGCCAGTGGCCGGACATCTATGAATATGTTAGTTAGTGATGAAGGAAATAAATTGGAGGGTGCAGTTACAGAGTCAGTACCATGCCAATCTAATTCTGTTGTTGAGGCTAAAGTGGTTTCTGAGATCTCTTCTGGGGGTTTTGGAAAGGATTTAACAGGGCAGAAACAATCACTGCCTCCGTGTCTTGATGATAGGAATAATAAATGTGAAGCAGTTGCTGATGTAGCTGAATCAGGAAGCTCAGTTCGAGGTACAAGTACAATGGTGAATGCTTCACCCTTAACTGCAGGCGCTTCTCGTACAGGCTTGAATCTTGAAGTTGAAAATAAACATCAAGTGTCTCTTGGAGAGCCCTGTATATCAGCATTGCCGCGGGGGAATTTTCAGTCCAATGCAAAATTATTGTTGCAAGATGCTGTCGCTGTTGCTGTTCAAGGAGAACAAAAAGCTGTTCAAGATCAACTACCTTCTGCGTCTAATTTTCAGGGAAGTATAGACGTGCACCGTCAAAATTCCACAAGCAAAGATGGGAAACGTGTTCATATTCCCAGCTGTTTATTGGACCGTGTTGAGCCTAGTAGCATCCTGCAGCGCTTTTCCTTGCCCATTAAACAAGAAGTGAGGGGTGATGTTAGTTGCAGCAGTTCGGCGTCTGAATTGACACACACATCCCAAAAGATTGAACAAGCCTGTAATCGTTACAAATCAGAGTTGTGCCATTCAGCAGATTCTGAAGTGACATCCAGAAATGGTGATGTGAAGTTGTTTGGGAAGATATTAACCAATCCTTCATCCAATCAAAAATCTAATTTGAATTCCAAGGGACGTGAGGAAACTGGTACCCGTCAGCCAAAGACGAGTAGCAAGTCTTCTACCCTGAAATTCAATGGCCACTGCCATCAAAATCCTGATGGAAATTCAACAATTTTGAAGTTTGATTGTGGTGATTACAACATAGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAATAAAATACAGACTGGCATTCCATCATTGCCTGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCCTTTAATAATTATGCTACCTCGTCAGCTAAACTGGAGCAACAGTCATTGCACACATTTACCAAGAGTAATGAACAGCAGCTGAATAGCTCTGCGTTTACAACTCGAGAAATCAATAGCAGCAATGGTGTGATTGATTATCAGATGTTTAGAAGTAGGGATGCCCCGAAAGTGCAGCCATTTATGGTAGACATGAAAAACCGCCAAGAAGTATACTCTGAGGTGCAGAGACGAAATGGTTTTGAAGCAATAGCAAATTTACAGCAGCAAGGGAGAGGAATGGTTGGATTGAATGGTGTAGGGAGGCCGGGGATTCGGGTGGGAGGATCACACAGTGGCGTCTCAGATATTGTGGCAGCCATCAAAATGCATTATTCCAATTCTGACCAGTATGGTGGTCATAATGGAAGTATCATGAGGGAAGACGAATCATGGGGAGGAAAGAAAGGGGACTTAAGCAGGTAG 5067 0.4328 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHGSREFSRWGSADFRRPPGHGKQGSWHLFSEDSGHGYAQSRSSEKMLEEENCRPSVSRGDGKYGRNSRENRGSFSQRDWRGHSWEASNGSPNLSRRPSDVTIDQRSADDMLTYPSHHHSDFVNTWDQHHMKDQHDKMGGVNGLGNAQRLDREHSLGSIDWKPLKWTRSGSLSSRGSGFSHTSSSRSGGADSNEAKSELHPKIATPIESHSGDGAACATSSAPSEDMISRKKPRLNWGEGLAKYEKKKIEEPDASASKDGPVLSTSNIEPSNFLGSNLLDKSPKVTGFSDCASPATPSSVACSSSPAGVEDKLYGKAVNSDNDISNLNGLLDPGPQNHLQTFSLNLEKLDIDSLSSLGSSLIGLLQSDDPSSVDPSAANSTAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCRPAALGSSVVANNTKSCEEQVRGYDKVSRPEPLQVCSSADPDVEKISLSTKVNNIHENGKEEDIDSPGTATSKFVEPQPLMQTVSSCDIGGNDNCSGGFDAIQSASSRCLVPCSTSERAMEIKDDMGAAPGASACSRSEDILCNAIISSNKEYANRVCEEFAQLLPKDCFKIGNIRAITDSCSSAAAVREKFVERKRLARIKERVITLKFKALHHQWKEDMRLLSVRKCRPKSQKKLEAGIRTTNNGFQKNRSSIRSRISYPGNNLSLVPTSEINNFASKLLSDPQVKVYRSALKMPALILDEKEKMILRFPCSNGLVEDPLAYEKERAMINPWTSEEREIFMEKFAAFGKDFRKISSFLDHKTTADCVEFYYKNHKSECFDKIKKDVRKLGKSYLTNTDLVASGKKWNREINAASLEILSAASVIAGHADRINGNKKLRSGSSLLGGYGNVKRSKVEDSLLEMSNSFDALRDEREVVAADVLAGISGSISSEAMSSCITSSVDPVEGSRDRSLKINLGKKQLLTPDVIQSGDDDSCSDESCEEMDPADWTDEERSAFLQAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKSINAGYPANDDANGGGSDTDDACVVETGSAIGPDRSGTKTDEDQPVSLMNTCSDEFNSVEVRVLSTDLNKSNNIGAEGVQDGDGVDDMVSDACEMDEKPKLCYDDGGDVLYSSDKSAAASGRTSMNMLVSDEGNKLEGAVTESVPCQSNSVVEAKVVSEISSGGFGKDLTGQKQSLPPCLDDRNNKCEAVADVAESGSSVRGTSTMVNASPLTAGASRTGLNLEVENKHQVSLGEPCISALPRGNFQSNAKLLLQDAVAVAVQGEQKAVQDQLPSASNFQGSIDVHRQNSTSKDGKRVHIPSCLLDRVEPSSILQRFSLPIKQEVRGDVSCSSSASELTHTSQKIEQACNRYKSELCHSADSEVTSRNGDVKLFGKILTNPSSNQKSNLNSKGREETGTRQPKTSSKSSTLKFNGHCHQNPDGNSTILKFDCGDYNIGLENVPMRSYGYWDGNKIQTGIPSLPDSAILLAKYPAAFNNYATSSAKLEQQSLHTFTKSNEQQLNSSAFTTREINSSNGVIDYQMFRSRDAPKVQPFMVDMKNRQEVYSEVQRRNGFEAIANLQQQGRGMVGLNGVGRPGIRVGGSHSGVSDIVAAIKMHYSNSDQYGGHNGSIMREDESWGGKKGDLSR 1688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5871g00014 1688 Gene3D - 966 1060 - -
Pral5871g00014 1688 SMART sant 1003 1051 IPR001005 -
Pral5871g00014 1688 SMART sant 787 835 IPR001005 -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 33 47 - -
Pral5871g00014 1688 CDD SANT 1007 1045 IPR001005 -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 1665 1688 - -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 201 269 - -
Pral5871g00014 1688 Coils Coil 425 452 - -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 1462 1476 - -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 990 1007 - -
Pral5871g00014 1688 ProSiteProfiles SANT domain profile. 1006 1053 IPR017884 -
Pral5871g00014 1688 ProSiteProfiles Myb-like domain profile. 999 1049 IPR001005 -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 202 227 - -
Pral5871g00014 1688 SUPERFAMILY Homeodomain-like 774 835 IPR009057 -
Pral5871g00014 1688 SUPERFAMILY Homeodomain-like 1004 1053 IPR009057 -
Pral5871g00014 1688 ProSiteProfiles SANT domain profile. 786 837 IPR017884 -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 283 302 - -
Pral5871g00014 1688 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1684 - -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 986 1007 - -
Pral5871g00014 1688 Pfam Myb-like DNA-binding domain 1006 1046 IPR001005 -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 116 136 - -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 1436 1476 - -
Pral5871g00014 1688 Gene3D - 767 839 - -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 1437 1455 - -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 78 114 - -
Pral5871g00014 1688 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1007 1056 IPR017930 -
Pral5871g00014 1688 MobiDBLite consensus disorder prediction 17 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5871g00014 Pral-Chr5871 41175 48974 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5871g00014 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5871g00014 - - gsj:114403608 1971.82