Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5871g00013 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCGCTGGGCTCTGTGGCGCGATGGAGAGACTCTTCTCATCATGGTTCCCGAGAGTTCAGTCGTTGGGGATCGGCCGATTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTTTTCCGAAGATTCTGGGCATGGATATGCACAATCTCGGTCCAGTGAAAAGATGCTGGAAGAAGAGAACTGTCGTCCATCCGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAAAATAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAGGCCAGCAACGGCTCTCCAAATTTGTCCAGGAGGCCATCGGATGTGACTATTGACCAGAGGTCAGCTGATGACATGCTAACATATCCTTCTCACCATCATTCCGATTTTGTAAATACTTGGGATCAGCATCATATGAAAGACCAGCACGATAAGATGGGTGGTGTCAACGGGTTGGGTAACGCACAGAGATTGGATAGAGAGCATTCTCTTGGTTCAATTGACTGGAAGCCTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCACACAAGTAGCTCAAGGAGTGGAGGGGCAGATTCCAATGAAGCTAAATCTGAATTGCATCCAAAAATTGCAACTCCTATTGAATCCCATTCAGGGGATGGGGCTGCATGTGCGACATCTTCTGCACCCTCTGAAGATATGATATCCAGGAAGAAGCCTCGGTTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAAAAGAAAATTGAGGAACCTGATGCGAGTGCAAGCAAGGATGGGCCTGTCTTGTCTACTAGTAATATTGAACCCTCTAATTTTCTTGGTTCAAATTTACTAGATAAAAGCCCAAAAGTTACAGGTTTTTCAGATTGTGCATCTCCAGCCACTCCATCTTCTGTTGCCTGCAGTTCCTCCCCAGGTGTGGAGGATAAATTGTATGGAAAAGCCGTGAATAGCGACAATGATATTAGTAATTTGAATGGCTTATTGGACCCCGGGCCTCAGAATCATCTACAGACGTTCTCTTTGAATTTAGAGAAGTTGGATATTGATTCCCTTAGTAGTTTGGGTTCTTCACTTATTGGGTTGCTACAATCTGATGACCCAAGTTCTGTGGATCCTAGCGCAGCAAATTCCACTGCAATGAATAAGTTGCTGATATGGAAAGCTGACCTTTCGAAGGTATTGGAGGTTACTGAAGCTGAAATAGATTTACTAGAAAGTGAGTTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGTCGTCCTGCAGCATTGGGCTCCTCAGTGGTGGCAAACAACACAAAGTCTTGTGAAGAACAAGTTAGAGGCTATGATAAGGTCTCCAGGCCTGAGCCATTGCAGGTTTGTTCTTCTGCTGATCCTGATGTTGAGAAGATTTCCCTTTCAACTAAAGTGAATAATATTCATGAAAATGGCAAGGAGGAAGATATTGATAGTCCTGGAACGGCAACTTCTAAATTTGTGGAGCCTCAACCTCTTATGCAAACTGTCTCTTCATGTGATATAGGCGGAAATGATAATTGCTCTGGAGGCTTTGATGCCATTCAATCTGCAAGCAGTAGATGCTTAGTCCCTTGTTCCACTAGTGAGCGAGCTATGGAGATAAAAGATGACATGGGTGCTGCTCCTGGTGCAAGTGCTTGCTCTAGATCTGAGGATATATTGTGTAATGCAATTATTTCTTCTAATAAAGAATATGCAAACAGAGTGTGTGAAGAATTTGCTCAGTTATTGCCAAAAGATTGTTTTAAGATTGGTAACATAAGAGCTATCACTGATTCATGCTCTTCAGCTGCCGCTGTTAGAGAAAAATTTGTAGAGAGAAAGCGGTTAGCAAGGATTAAGGAGCGAGTAATAACCCTAAAGTTTAAAGCCTTGCATCATCAATGGAAAGAAGATATGCGATTACTGTCTGTACGAAAATGCCGCCCAAAATCTCAAAAGAAACTTGAAGCGGGCATTCGAACTACTAATAATGGTTTTCAAAAGAATCGGTCCTCCATTCGTTCTCGGATATCCTACCCTGGAAATAATTTAAGCCTTGTTCCAACATCTGAGATAAATAATTTTGCAAGCAAACTTCTCTCTGATCCCCAAGTTAAAGTTTACCGGAGCGCCTTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAGATGATATTGAGGTTTCCGTGTAGTAATGGGTTGGTTGAAGATCCTTTGGCGTATGAGAAAGAGAGGGCGATGATCAACCCTTGGACATCCGAAGAGAGAGAGATTTTCATGGAGAAATTTGCTGCTTTTGGGAAAGACTTCCGGAAAATTTCTTCTTTTCTTGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGTTTTGACAAAATTAAGAAGGATGTTAGAAAGCTAGGGAAGTCATATTTGACCAACACTGACTTAGTAGCATCAGGAAAGAAATGGAATCGAGAAATAAATGCTGCTTCACTTGAGATTTTGAGTGCAGCTTCAGTGATAGCGGGCCATGCAGACAGAATAAATGGTAATAAGAAATTGCGTTCAGGAAGTTCTCTTTTAGGGGGCTATGGTAATGTGAAAAGATCTAAGGTTGAGGATAGTCTCCTAGAGATGTCAAACAGTTTTGATGCTCTTAGGGACGAGAGAGAGGTAGTTGCGGCTGATGTTTTGGCTGGTATAAGTGGTTCTATATCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCTGTTGATCCTGTAGAGGGTAGCAGGGACAGGAGTTTGAAAATAAACCTTGGGAAAAAGCAGTTGTTGACACCTGATGTTATTCAGAGTGGTGATGATGATTCCTGTTCAGACGAGAGCTGCGAGGAGATGGATCCTGCTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCAGGCTGTGTCATCTTATGGAAAGGACTTTGCTAAGATCTCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTATTCTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTTATGCGGCCCAAGTCTATAAATGCAGGATACCCAGCGAATGATGATGCAAATGGTGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGACAGGTTCGGCAATTGGCCCTGATAGGTCAGGCACTAAAACTGATGAGGACCAGCCAGTGTCTCTCATGAATACATGCTCTGATGAATTTAATTCGGTTGAAGTCAGGGTTTTGTCAACTGATTTGAATAAATCAAATAATATTGGGGCAGAAGGGGTTCAAGATGGTGATGGTGTGGATGATATGGTTTCTGATGCTTGTGAAATGGATGAAAAGCCTAAACTGTGCTATGATGATGGTGGGGATGTCTTGTACAGTTCTGACAAGTCTGCTGCTGCCAGTGGCCGGACATCTATGAATATGTTAGTTAGTGATGAAGGAAATAAATTGGAGGGTGCAGTTACAGAGTCAGTACCATGCCAATCTAATTCTGTTGTTGAGGCTAAAGTGGTTTCTGAGATCTCTTCTGGGGGTTTTGGAAAGGATTTAACAGGGCAGAAACAATCACTGCCTCCGTGTCTTGATGATAGGAATAATAAATGTGAAGCAGTTGCTGATGTAGCTGAATCAGGAAGCTCAGTTCGAGGTACAAGTACAATGGTGAATGCTTCACCCTTAACTGCAGGCGCTTCTCGTACAGGCTTGAATCTTGAAGTTGAAAATAAACATCAAGTGTCTCTTGGAGAGCCCTGTATATCAGCATTGCCGCGGGGGAATTTTCAGTCCAATGCAAAATTATTGTTGCAAGATGCTGTCGCTGTTGCTGTTCAAGGAGAACAAAAAGCTGTTCAAGATCAACTACCTTCTGCGTCTAATTTTCAGGGAAGTATAGACGTGCACCGTCAAAATTCCACAAGCAAAGATGGGAAACGTGTTCATATTCCCAGCTGTTTATTGGACCGTGTTGAGCCTAGTAGCATCCTGCAGCGCTTTTCCTTGCCCATTAAACAAGAAGTGAGGGGTGATGTTAGTTGCAGCAGTTCGGCGTCTGAATTGACACACACATCCCAAAAGATTGAACAAGCCTGTAATCGTTACAAATCAGAGTTGTGCCATTCAGCAGATTCTGAAGTGACATCCAGAAATGGTGATGTGAAGTTGTTTGGGAAGATATTAACCAATCCTTCATCCAATCAAAAATCTAATTTGAATTCCAAGGGACGTGAGGAAACTGGTACCCGTCAGCCAAAGACGAGTAGCAAGTCTTCTACCCTGAAATTCAATGGCCACTGCCATCAAAATCCTGATGGAAATTCAACAATTTTGAAGTTTGATTGTGGTGATTACAACATAGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAATAAAATACAGACTGGCATTCCATCATTGCCTGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCCTTTAATAATTATGCTACCTCGTCAGCTAAACTGGAGCAACAGTCATTGCACACATTTACCAAGAGTAATGAACAGCAGCTGAATAGCTCTGCGTTTACAACTCGAGAAATCAATAGCAGCAATGGTGTGATTGATTATCAGATGTTTAGAAGTAGGGATGCCCCGAAAGTGCAGCCATTTATGGTAGACATGAAAAACCGCCAAGAAGTATACTCTGAGGTGCAGAGACGAAATGGTTTTGAAGCAATAGCAAATTTACAGCAGCAAGGGAGAGGAATGGTTGGATTGAATGGTGTAGGGAGGCCGGGGATTCGGGTGGGAGGATCACACAGTGGCGTCTCAGATATTGTGGCAGCCATCAAAATGCATTATTCCAATTCTGACCAGTATGGTGGTCATAATGGAAGTATCATGAGGGAAGACGAATCATGGGGAGGAAAGAAAGGGGACTTAAGCAGGTAG 5064 0.4327 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHGSREFSRWGSADFRRPPGHGKQGSWHLFSEDSGHGYAQSRSSEKMLEEENCRPSVSRGDGKYGRNSRENRGSFSQRDWRGHSWEASNGSPNLSRRPSDVTIDQRSADDMLTYPSHHHSDFVNTWDQHHMKDQHDKMGGVNGLGNAQRLDREHSLGSIDWKPLKWTRSGSLSSRGSGFSHTSSSRSGGADSNEAKSELHPKIATPIESHSGDGAACATSSAPSEDMISRKKPRLNWGEGLAKYEKKKIEEPDASASKDGPVLSTSNIEPSNFLGSNLLDKSPKVTGFSDCASPATPSSVACSSSPGVEDKLYGKAVNSDNDISNLNGLLDPGPQNHLQTFSLNLEKLDIDSLSSLGSSLIGLLQSDDPSSVDPSAANSTAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCRPAALGSSVVANNTKSCEEQVRGYDKVSRPEPLQVCSSADPDVEKISLSTKVNNIHENGKEEDIDSPGTATSKFVEPQPLMQTVSSCDIGGNDNCSGGFDAIQSASSRCLVPCSTSERAMEIKDDMGAAPGASACSRSEDILCNAIISSNKEYANRVCEEFAQLLPKDCFKIGNIRAITDSCSSAAAVREKFVERKRLARIKERVITLKFKALHHQWKEDMRLLSVRKCRPKSQKKLEAGIRTTNNGFQKNRSSIRSRISYPGNNLSLVPTSEINNFASKLLSDPQVKVYRSALKMPALILDEKEKMILRFPCSNGLVEDPLAYEKERAMINPWTSEEREIFMEKFAAFGKDFRKISSFLDHKTTADCVEFYYKNHKSECFDKIKKDVRKLGKSYLTNTDLVASGKKWNREINAASLEILSAASVIAGHADRINGNKKLRSGSSLLGGYGNVKRSKVEDSLLEMSNSFDALRDEREVVAADVLAGISGSISSEAMSSCITSSVDPVEGSRDRSLKINLGKKQLLTPDVIQSGDDDSCSDESCEEMDPADWTDEERSAFLQAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKSINAGYPANDDANGGGSDTDDACVVETGSAIGPDRSGTKTDEDQPVSLMNTCSDEFNSVEVRVLSTDLNKSNNIGAEGVQDGDGVDDMVSDACEMDEKPKLCYDDGGDVLYSSDKSAAASGRTSMNMLVSDEGNKLEGAVTESVPCQSNSVVEAKVVSEISSGGFGKDLTGQKQSLPPCLDDRNNKCEAVADVAESGSSVRGTSTMVNASPLTAGASRTGLNLEVENKHQVSLGEPCISALPRGNFQSNAKLLLQDAVAVAVQGEQKAVQDQLPSASNFQGSIDVHRQNSTSKDGKRVHIPSCLLDRVEPSSILQRFSLPIKQEVRGDVSCSSSASELTHTSQKIEQACNRYKSELCHSADSEVTSRNGDVKLFGKILTNPSSNQKSNLNSKGREETGTRQPKTSSKSSTLKFNGHCHQNPDGNSTILKFDCGDYNIGLENVPMRSYGYWDGNKIQTGIPSLPDSAILLAKYPAAFNNYATSSAKLEQQSLHTFTKSNEQQLNSSAFTTREINSSNGVIDYQMFRSRDAPKVQPFMVDMKNRQEVYSEVQRRNGFEAIANLQQQGRGMVGLNGVGRPGIRVGGSHSGVSDIVAAIKMHYSNSDQYGGHNGSIMREDESWGGKKGDLSR 1687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5871g00013 1687 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1683 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 1436 1454 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 33 47 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 985 1006 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 201 269 - -
Pral5871g00013 1687 Pfam Myb-like DNA-binding domain 1005 1045 IPR001005 -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 202 227 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 989 1006 - -
Pral5871g00013 1687 Gene3D - 766 838 - -
Pral5871g00013 1687 SUPERFAMILY Homeodomain-like 1003 1052 IPR009057 -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 283 302 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 1461 1475 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 116 136 - -
Pral5871g00013 1687 SUPERFAMILY Homeodomain-like 773 834 IPR009057 -
Pral5871g00013 1687 ProSiteProfiles SANT domain profile. 785 836 IPR017884 -
Pral5871g00013 1687 ProSiteProfiles Myb-like domain profile. 998 1048 IPR001005 -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 78 114 - -
Pral5871g00013 1687 CDD SANT 1006 1044 IPR001005 -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 1664 1687 - -
Pral5871g00013 1687 ProSiteProfiles SANT domain profile. 1005 1052 IPR017884 -
Pral5871g00013 1687 Coils Coil 424 451 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 17 150 - -
Pral5871g00013 1687 SMART sant 1002 1050 IPR001005 -
Pral5871g00013 1687 SMART sant 786 834 IPR001005 -
Pral5871g00013 1687 Gene3D - 965 1059 - -
Pral5871g00013 1687 MobiDBLite consensus disorder prediction 1435 1475 - -
Pral5871g00013 1687 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1006 1055 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5871g00013 Pral-Chr5871 41175 48974 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5871g00013 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5871g00013 - - gmx:100810588 1972.98