Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5871g00012 ATGGTTCCCGAGAGTTCAGTCGTTGGGGATCGGCCGATTTCCGCAGACCGCCAGGGAAGTTGGCACCTGTTTTCCGAAGATTCTGGGCATGGATATGCACAATCTCGGTCCAGTGAAAAGATGCTGGAAGAAGAGAACTGTCGTCCATCCGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAAAATAGAGGATCCTTTAGCCAGAGAGATTGGAGAGGACATTCATGGGAGGCCAGCAACGGCTCTCCAAATTTGTCCAGGAGGCCATCGGATGTGACTATTGACCAGAGGTCAGCTGATGACATGCTAACATATCCTTCTCACCATCATTCCGATTTTGTAAATACTTGGGATCAGCATCATATGAAAGACCAGCACGATAAGATGGGTGGTGTCAACGGGTTGGGTAACGCACAGAGATTGGATAGAGAGCATTCTCTTGGTTCAATTGACTGGAAGCCTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCACACAAGTAGCTCAAGGAGTGGAGGGGCAGATTCCAATGAAGCTAAATCTGAATTGCATCCAAAAATTGCAACTCCTATTGAATCCCATTCAGGGGATGGGGCTGCATGTGCGACATCTTCTGCACCCTCTGAAGATATGATATCCAGGAAGAAGCCTCGGTTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAAAAGAAAATTGAGGAACCTGATGCGAGTGCAAGCAAGGATGGGCCTGTCTTGTCTACTAGTAATATTGAACCCTCTAATTTTCTTGGTTCAAATTTACTAGATAAAAGCCCAAAAGTTACAGGTTTTTCAGATTGTGCATCTCCAGCCACTCCATCTTCTGTTGCCTGCAGTTCCTCCCCAGCAGGTGTGGAGGATAAATTGTATGGAAAAGCCGTGAATAGCGACAATGATATTAGTAATTTGAATGGCTTATTGGACCCCGGGCCTCAGAATCATCTACAGACGTTCTCTTTGAATTTAGAGAAGTTGGATATTGATTCCCTTAGTAGTTTGGGTTCTTCACTTATTGGGTTGCTACAATCTGATGACCCAAGTTCTGTGGATCCTAGCGCAGCAAATTCCACTGCAATGAATAAGTTGCTGATATGGAAAGCTGACCTTTCGAAGGTATTGGAGGTTACTGAAGCTGAAATAGATTTACTAGAAAGTGAGTTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGTCGTCCTGCAGCATTGGGCTCCTCAGTGGTGGCAAACAACACAAAGTCTTGTGAAGAACAAGTTAGAGGCTATGATAAGGTCTCCAGGCCTGAGCCATTGCAGGTTTGTTCTTCTGCTGATCCTGATGTTGAGAAGATTTCCCTTTCAACTAAAGTGAATAATATTCATGAAAATGGCAAGGAGGAAGATATTGATAGTCCTGGAACGGCAACTTCTAAATTTGTGGAGCCTCAACCTCTTATGCAAACTGTCTCTTCATGTGATATAGGCGGAAATGATAATTGCTCTGGAGGCTTTGATGCCATTCAATCTGCAAGCAGTAGATGCTTAGTCCCTTGTTCCACTAGTGAGCGAGCTATGGAGATAAAAGATGACATGGGTGCTGCTCCTGGTGCAAGTGCTTGCTCTAGATCTGAGGATATATTGTGTAATGCAATTATTTCTTCTAATAAAGAATATGCAAACAGAGTGTGTGAAGAATTTGCTCAGTTATTGCCAAAAGATTGTTTTAAGATTGGTAACATAAGAGCTATCACTGATTCATGCTCTTCAGCTGCCGCTGTTAGAGAAAAATTTGTAGAGAGAAAGCGGTTAGCAAGGATTAAGGAGCGAGTAATAACCCTAAAGTTTAAAGCCTTGCATCATCAATGGAAAGAAGATATGCGATTACTGTCTGTACGAAAATGCCGCCCAAAATCTCAAAAGAAACTTGAAGCGGGCATTCGAACTACTAATAATGGTTTTCAAAAGAATCGGTCCTCCATTCGTTCTCGGATATCCTACCCTGGAAATAATTTAAGCCTTGTTCCAACATCTGAGATAAATAATTTTGCAAGCAAACTTCTCTCTGATCCCCAAGTTAAAGTTTACCGGAGCGCCTTGAAGATGCCAGCATTAATTTTGGATGAGAAGGAGAAGATGATATTGAGGTTTCCGTGTAGTAATGGGTTGGTTGAAGATCCTTTGGCGTATGAGAAAGAGAGGGCGATGATCAACCCTTGGACATCCGAAGAGAGAGAGATTTTCATGGAGAAATTTGCTGCTTTTGGGAAAGACTTCCGGAAAATTTCTTCTTTTCTTGATCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGTTTTGACAAAATTAAGAAGGATGTTAGAAAGCTAGGGAAGTCATATTTGACCAACACTGACTTAGTAGCATCAGGAAAGAAATGGAATCGAGAAATAAATGCTGCTTCACTTGAGATTTTGAGTGCAGCTTCAGTGATAGCGGGCCATGCAGACAGAATAAATGGTAATAAGAAATTGCGTTCAGGAAGTTCTCTTTTAGGGGGCTATGGTAATGTGAAAAGATCTAAGGTTGAGGATAGTCTCCTAGAGATGTCAAACAGTTTTGATGCTCTTAGGGACGAGAGAGAGGTAGTTGCGGCTGATGTTTTGGCTGGTATAAGTGGTTCTATATCATCTGAGGCTATGAGTTCCTGCATAACAAGTTCTGTTGATCCTGTAGAGGGTAGCAGGGACAGGAGTTTGAAAATAAACCTTGGGAAAAAGCAGTTGTTGACACCTGATGTTATTCAGAGTGGTGATGATGATTCCTGTTCAGACGAGAGCTGCGAGGAGATGGATCCTGCTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCAGGCTGTGTCATCTTATGGAAAGGACTTTGCTAAGATCTCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTATTCTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTTATGCGGCCCAAGTCTATAAATGCAGGATACCCAGCGAATGATGATGCAAATGGTGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGACAGGTTCGGCAATTGGCCCTGATAGGTCAGGCACTAAAACTGATGAGGACCAGCCAGTGTCTCTCATGAATACATGCTCTGATGAATTTAATTCGGTTGAAGTCAGGGTTTTGTCAACTGATTTGAATAAATCAAATAATATTGGGGCAGAAGGGGTTCAAGATGGTGATGGTGTGGATGATATGGTTTCTGATGCTTGTGAAATGGATGAAAAGCCTAAACTGTGCTATGATGATGGTGGGGATGTCTTGTACAGTTCTGACAAGTCTGCTGCTGCCAGTGGCCGGACATCTATGAATATGTTAGTTAGTGATGAAGGAAATAAATTGGAGGGTGCAGTTACAGAGTCAGTACCATGCCAATCTAATTCTGTTGTTGAGGCTAAAGTGGTTTCTGAGATCTCTTCTGGGGGTTTTGGAAAGGATTTAACAGGGCAGAAACAATCACTGCCTCCGTGTCTTGATGATAGGAATAATAAATGTGAAGCAGTTGCTGATGTAGCTGAATCAGGAAGCTCAGTTCGAGGTACAAGTACAATGGTGAATGCTTCACCCTTAACTGCAGGCGCTTCTCGTACAGGCTTGAATCTTGAAGTTGAAAATAAACATCAAGTGTCTCTTGGAGAGCCCTGTATATCAGCATTGCCGCGGGGGAATTTTCAGTCCAATGCAAAATTATTGTTGCAAGATGCTGTCGCTGTTGCTGTTCAAGGAGAACAAAAAGCTGTTCAAGATCAACTACCTTCTGCGTCTAATTTTCAGGGAAGTATAGACGTGCACCGTCAAAATTCCACAAGCAAAGATGGGAAACGTGTTCATATTCCCAGCTGTTTATTGGACCGTGTTGAGCCTAGTAGCATCCTGCAGCGCTTTTCCTTGCCCATTAAACAAGAAGTGAGGGGTGATGTTAGTTGCAGCAGTTCGGCGTCTGAATTGACACACACATCCCAAAAGATTGAACAAGCCTGTAATCGTTACAAATCAGAGTTGTGCCATTCAGCAGATTCTGAAGTGACATCCAGAAATGGTGATGTGAAGTTGTTTGGGAAGATATTAACCAATCCTTCATCCAATCAAAAATCTAATTTGAATTCCAAGGGACGTGAGGAAACTGGTACCCGTCAGCCAAAGACGAGTAGCAAGTCTTCTACCCTGAAATTCAATGGCCACTGCCATCAAAATCCTGATGGAAATTCAACAATTTTGAAGTTTGATTGTGGTGATTACAACATAGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGATGGGAATAAAATACAGACTGGCATTCCATCATTGCCTGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCCTTTAATAATTATGCTACCTCGTCAGCTAAACTGGAGCAACAGTCATTGCACACATTTACCAAGAGTAATGAACAGCAGCTGAATAGCTCTGCGTTTACAACTCGAGAAATCAATAGCAGCAATGGTGTGATTGATTATCAGATGTTTAGAAGTAGGGATGCCCCGAAAGTGCAGCCATTTATGGTAGACATGAAAAACCGCCAAGAAGTATACTCTGAGGTGCAGAGACGAAATGGTTTTGAAGCAATAGCAAATTTACAGCAGCAAGGGAGAGGAATGGTTGGATTGAATGGTGTAGGGAGGCCGGGGATTCGGGTGGGAGGATCACACAGTGGCGTCTCAGATATTGTGGCAGCCATCAAAATGCATTATTCCAATTCTGACCAGTATGGTGGTCATAATGGAAGTATCATGAGGGAAGACGAATCATGGGGAGGAAAGAAAGGGGACTTAAGCAGGTAG 4944 0.4292 MVPESSVVGDRPISADRQGSWHLFSEDSGHGYAQSRSSEKMLEEENCRPSVSRGDGKYGRNSRENRGSFSQRDWRGHSWEASNGSPNLSRRPSDVTIDQRSADDMLTYPSHHHSDFVNTWDQHHMKDQHDKMGGVNGLGNAQRLDREHSLGSIDWKPLKWTRSGSLSSRGSGFSHTSSSRSGGADSNEAKSELHPKIATPIESHSGDGAACATSSAPSEDMISRKKPRLNWGEGLAKYEKKKIEEPDASASKDGPVLSTSNIEPSNFLGSNLLDKSPKVTGFSDCASPATPSSVACSSSPAGVEDKLYGKAVNSDNDISNLNGLLDPGPQNHLQTFSLNLEKLDIDSLSSLGSSLIGLLQSDDPSSVDPSAANSTAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCRPAALGSSVVANNTKSCEEQVRGYDKVSRPEPLQVCSSADPDVEKISLSTKVNNIHENGKEEDIDSPGTATSKFVEPQPLMQTVSSCDIGGNDNCSGGFDAIQSASSRCLVPCSTSERAMEIKDDMGAAPGASACSRSEDILCNAIISSNKEYANRVCEEFAQLLPKDCFKIGNIRAITDSCSSAAAVREKFVERKRLARIKERVITLKFKALHHQWKEDMRLLSVRKCRPKSQKKLEAGIRTTNNGFQKNRSSIRSRISYPGNNLSLVPTSEINNFASKLLSDPQVKVYRSALKMPALILDEKEKMILRFPCSNGLVEDPLAYEKERAMINPWTSEEREIFMEKFAAFGKDFRKISSFLDHKTTADCVEFYYKNHKSECFDKIKKDVRKLGKSYLTNTDLVASGKKWNREINAASLEILSAASVIAGHADRINGNKKLRSGSSLLGGYGNVKRSKVEDSLLEMSNSFDALRDEREVVAADVLAGISGSISSEAMSSCITSSVDPVEGSRDRSLKINLGKKQLLTPDVIQSGDDDSCSDESCEEMDPADWTDEERSAFLQAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKSINAGYPANDDANGGGSDTDDACVVETGSAIGPDRSGTKTDEDQPVSLMNTCSDEFNSVEVRVLSTDLNKSNNIGAEGVQDGDGVDDMVSDACEMDEKPKLCYDDGGDVLYSSDKSAAASGRTSMNMLVSDEGNKLEGAVTESVPCQSNSVVEAKVVSEISSGGFGKDLTGQKQSLPPCLDDRNNKCEAVADVAESGSSVRGTSTMVNASPLTAGASRTGLNLEVENKHQVSLGEPCISALPRGNFQSNAKLLLQDAVAVAVQGEQKAVQDQLPSASNFQGSIDVHRQNSTSKDGKRVHIPSCLLDRVEPSSILQRFSLPIKQEVRGDVSCSSSASELTHTSQKIEQACNRYKSELCHSADSEVTSRNGDVKLFGKILTNPSSNQKSNLNSKGREETGTRQPKTSSKSSTLKFNGHCHQNPDGNSTILKFDCGDYNIGLENVPMRSYGYWDGNKIQTGIPSLPDSAILLAKYPAAFNNYATSSAKLEQQSLHTFTKSNEQQLNSSAFTTREINSSNGVIDYQMFRSRDAPKVQPFMVDMKNRQEVYSEVQRRNGFEAIANLQQQGRGMVGLNGVGRPGIRVGGSHSGVSDIVAAIKMHYSNSDQYGGHNGSIMREDESWGGKKGDLSR 1647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 1395 1435 - -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 37 73 - -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 945 966 - -
Pral5871g00012 1647 Pfam Myb-like DNA-binding domain 965 1005 IPR001005 -
Pral5871g00012 1647 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 966 1015 IPR017930 -
Pral5871g00012 1647 ProSiteProfiles SANT domain profile. 745 796 IPR017884 -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 75 94 - -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 949 966 - -
Pral5871g00012 1647 ProSiteProfiles Myb-like domain profile. 958 1008 IPR001005 -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 161 228 - -
Pral5871g00012 1647 CDD SANT 966 1004 IPR001005 -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 1421 1435 - -
Pral5871g00012 1647 SUPERFAMILY Homeodomain-like 733 794 IPR009057 -
Pral5871g00012 1647 ProSiteProfiles SANT domain profile. 965 1012 IPR017884 -
Pral5871g00012 1647 Gene3D - 925 1019 - -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 242 261 - -
Pral5871g00012 1647 SMART sant 746 794 IPR001005 -
Pral5871g00012 1647 SMART sant 962 1010 IPR001005 -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 1624 1647 - -
Pral5871g00012 1647 Coils Coil 384 411 - -
Pral5871g00012 1647 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 1643 - -
Pral5871g00012 1647 Gene3D - 726 798 - -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 161 186 - -
Pral5871g00012 1647 SUPERFAMILY Homeodomain-like 963 1012 IPR009057 -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 1396 1414 - -
Pral5871g00012 1647 MobiDBLite consensus disorder prediction 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5871g00012 Pral-Chr5871 41175 48975 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral5871g00012 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5871g00012 - - gsj:114403608 1859.73