Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5870g00003 ATGGCTGAACCAATTTCATCCTCCGATCTGACTTTCGATGATTTATCTTCGGAGTTTGATAACCTGCCTGTCCCATCCATGGATCCGCTCTTTTTCTCCGGCAACGAGCATGCCATGCCCTCTGAAGCATTCGCGTCGGATCTTGAATTAGCCATGGAGTTGGGGACTGATGGCGATTTTGAGATTTCCTTTGACGATCTTGGCGATCTCCATATTCCTCACGAAACCGATGATTTCCTGCTCTCCGATGGCTATGCTCAGCCGCCTGGATCGCATGAATTGAATGACCATGGTAAGCAGTTGAGCTACGACAATGCCAATTCTGGGTCACCTGACTCGGATAGTTCTTCGGGTTCGGGGAATCGGAATCCTGATGTTTCAGAGTTTTTGAACACAAAATCACCTGAGTCCGGTAGTTGCGAGCGTTCTGTGACACACTCTTTGGAAAATTCGGGTGACCAGAACTCCCCTCATTCACTGCATGTCAAGGTTTCGAGCTTTAAATCGCCAGATTCGGATTCTTGCGACAGGGAATCTTCTGGTGGGTCCATTTCATCCCAGGGTTCAGGCAACGGTGGTTTAGGTGACTCGTGTGCTGATGAAGTGATGAAAACGTCTTCACCAGATTCTTACAGCGACGACAGAGACATTTCTTCTCATGGGATTACTCATCAAAATATGAAATTGGAGGACATGGGTAAAAACTGTGATTTGAAAAGGAAGAAGCAACAGAATGAAGGAAATACCGAGGCGAGAACTACCAAGTACCGAAAGTCTACGGTGAATACCTCTCAACAGTCTGATCTTAATGCCGTGGATGAAGAGGACGGGAAAAGGAAGGCTAGGCTGATGAGGAATAGAGAAAGTGCCCAGCTCTCCAGACAGAGAAAGAAGCACTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCCACCATAACTGATTTAAGCAGTAAGGTATCGTTTGTTATGGCCGAGAATGCTGCTTTGAGACAGCAATTGAGTGGCGGTGGAACTTGCCCGCCGCCAGCTCCAGGGGTGTACCCTCATCCTCCAATGGCACCAATGCCTTTTCCATGGGTGCCGTATGCACCCTATGTTGTCAAACCGCAAGGTTCTCAGGTTCCTCTAGTTCCTATCCCCAGATTGAAGTCTCAACAGTCGCAATCTGCGCCAAAAGCCAAAAAATCCGATAATAAGAAGACTGAAGGAAAAACTAAGAAGGTTGCTAGCATTAGCTTGTTGGGTTTGTTTTTCTTTATATTTCTTTTTGGTGGACTCGTTCCTCTAGTTAATGTTAAGTTTGGAGATATATGGGACAATGTTCCCAGGAGGCCCATCTCTGCTACTGATAGGTTCTATAGTCACCACGGAGGAAAAGCTTGGGAGGTTAATGGTCATATAAATACATCTGAAGGAGAAAAGGGAGTAAAATTCTCTAGCGGGAATTTGGGTATTTCCGACAGAACGTTATATGAGAAAGTTCGCAAATTAGAAGAAACACTGAGACAACAGGACTCACCATGTAGAATGAGCTCAGATGACTTTGTTCATAGAGGAAATACTAGTGACTCCGAGCCTCTTCTTGCTTCTCTGTATGTTCCAAGGAATGATAAGCTAGTGAAAATTGATGGAAACTTGATAATTCACTCTGTTCTGGCTACTGAAAAAGCCATGGCATCTGATACTGCTCATACAGAAAAGAATACGAGAGAAAATGGATTGATGATTTCTAAAAATTGGGATTCTGCACTGGCTATTCCTGACGTTGCAAGGAACAGCGGTCAACAACCTCACTCATATAGGAGCCCGCCTGAACAGCGGAAGGCTCTTGCCTCTGGTTCAGCTGAAACATTGAAGAACCATTTAAAGTCAACTGCGACTGATGGTAAAATGCAACAATGGTTTCGTGAAGGTCTTGCTGGGCCAATGTTGAGTTCTGGGATGTGCACGGAGGTTTTCCAGTTTGATGCTTCGCCAAAACCGGGAGCTATAGTTCCAGCATCATCAGTTGCAAATGTTTCTCCTGTTAACCGCCAGAATGATACAAGCATCAACAAGAGAAGGAATAGAAGGTTCCTTCACAAGCTGCCACGTTCCCTTGCCGGATCTGGTCTCAACACAAGTGAAGAACATGTTATGAGAAATTCCCAGAACGAGAACCTCCATGGTAATAAATCAACATCTTCCATGGTGGTTTCGGTCCTTGTTGATCCCAAAGAGGTGGGAGATGCTGACGTGGATGGTGTGATGAAGCCTAAATCACTTCCTCGGATTTTTGTGGTTGTGCTTATAGATAGTGTCAAGTATGTCACTTACTCGTGTGGCCTTCCACGAGCATCTCCCCATCTTGTGACTGCCTGA 2370 0.4553 MAEPISSSDLTFDDLSSEFDNLPVPSMDPLFFSGNEHAMPSEAFASDLELAMELGTDGDFEISFDDLGDLHIPHETDDFLLSDGYAQPPGSHELNDHGKQLSYDNANSGSPDSDSSSGSGNRNPDVSEFLNTKSPESGSCERSVTHSLENSGDQNSPHSLHVKVSSFKSPDSDSCDRESSGGSISSQGSGNGGLGDSCADEVMKTSSPDSYSDDRDISSHGITHQNMKLEDMGKNCDLKRKKQQNEGNTEARTTKYRKSTVNTSQQSDLNAVDEEDGKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSSKVSFVMAENAALRQQLSGGGTCPPPAPGVYPHPPMAPMPFPWVPYAPYVVKPQGSQVPLVPIPRLKSQQSQSAPKAKKSDNKKTEGKTKKVASISLLGLFFFIFLFGGLVPLVNVKFGDIWDNVPRRPISATDRFYSHHGGKAWEVNGHINTSEGEKGVKFSSGNLGISDRTLYEKVRKLEETLRQQDSPCRMSSDDFVHRGNTSDSEPLLASLYVPRNDKLVKIDGNLIIHSVLATEKAMASDTAHTEKNTRENGLMISKNWDSALAIPDVARNSGQQPHSYRSPPEQRKALASGSAETLKNHLKSTATDGKMQQWFREGLAGPMLSSGMCTEVFQFDASPKPGAIVPASSVANVSPVNRQNDTSINKRRNRRFLHKLPRSLAGSGLNTSEEHVMRNSQNENLHGNKSTSSMVVSVLVDPKEVGDADVDGVMKPKSLPRIFVVVLIDSVKYVTYSCGLPRASPHLVTA 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5870g00003 789 MobiDBLite consensus disorder prediction 595 618 - -
Pral5870g00003 789 MobiDBLite consensus disorder prediction 254 270 - -
Pral5870g00003 789 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 58 786 - -
Pral5870g00003 789 MobiDBLite consensus disorder prediction 100 169 - -
Pral5870g00003 789 FunFam bZIP transcription factor 49 277 339 - -
Pral5870g00003 789 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 276 336 IPR004827 GO:0003700|GO:0006355
Pral5870g00003 789 Gene3D - 277 339 - -
Pral5870g00003 789 SUPERFAMILY Leucine zipper domain 278 336 IPR046347 GO:0003700|GO:0006355
Pral5870g00003 789 MobiDBLite consensus disorder prediction 271 294 - -
Pral5870g00003 789 MobiDBLite consensus disorder prediction 83 294 - -
Pral5870g00003 789 MobiDBLite consensus disorder prediction 384 407 - -
Pral5870g00003 789 Pfam bZIP transcription factor 275 336 IPR004827 GO:0003700|GO:0006355
Pral5870g00003 789 MobiDBLite consensus disorder prediction 176 193 - -
Pral5870g00003 789 MobiDBLite consensus disorder prediction 230 253 - -
Pral5870g00003 789 Coils Coil 301 321 - -
Pral5870g00003 789 CDD bZIP_HY5-like 279 330 - -
Pral5870g00003 789 SMART brlzneu 274 338 IPR004827 GO:0003700|GO:0006355
Pral5870g00003 789 MobiDBLite consensus disorder prediction 207 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5870g00003 Pral-Chr5870 31927 35591 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5870g00003 17 788 bZIP Transcription Factor Family AT2G40950 46.320 3.06e-160 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5870g00003 bZIP_1 6.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5870g00003 K25783 - gmx:100127362 730.709