Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5870g00002 ATGGATCCGCTCTTTTTCTCCGGCAACGAGCATGCCATGCCCTCTGAAGCATTCGCGTCGGATCTTGAATTAGCCATGGAGTTGGGGACTGATGGCGATTTTGAGATTTCCTTTGACGATCTTGGCGATCTCCATATTCCTCACGAAACCGATGATTTCCTGCTCTCCGATGGCTATGCTCAGCCGCCTGGATCGCATGAATTGAATGACCATGGTAAGCAGTTGAGCTACGACAATGCCAATTCTGGGTCACCTGACTCGGATAGTTCTTCGGGTTCGGGGAATCGGAATCCTGATGTTTCAGAGTTTTTGAACACAAAATCACCTGAGTCCGGTAGTTGCGAGCGTTCTGTGACACACTCTTTGGAAAATTCGGGTGACCAGAACTCCCCTCATTCACTGCATGTCAAGGTTTCGAGCTTTAAATCGCCAGATTCGGATTCTTGCGACAGGGAATCTTCTGGTGGGTCCATTTCATCCCAGGGTTCAGGCAACGGTGGTTTAGGTGACTCGTGTGCTGATGAAGTGATGAAAACGTCTTCACCAGATTCTTACAGCGACGACAGAGACATTTCTTCTCATGGGATTACTCATCAAAATATGAAATTGGAGGACATGGGTAAAAACTGTGATTTGAAAAGGAAGAAGCAACAGAATGAAGGAAATACCGAGGCGAGAACTACCAAGTACCGAAAGTCTACGGTGAATACCTCTCAACAGTCTGATCTTAATGCCGTGGATGAAGAGGACGGGAAAAGGAAGGCTAGGCTGATGAGGAATAGAGAAAGTGCCCAGCTCTCCAGACAGAGAAAGAAGCACTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCCACCATAACTGATTTAAGCAGTAAGGTATCGTTTGTTATGGCCGAGAATGCTGCTTTGAGACAGCAATTGAGTGGCGGTGGAACTTGCCCGCCGCCAGCTCCAGGGGTGTACCCTCATCCTCCAATGGCACCAATGCCTTTTCCATGGGTGCCGTATGCACCCTATGTTGTCAAACCGCAAGGTTCTCAGGTTCCTCTAGTTCCTATCCCCAGATTGAAGTCTCAACAGTCGCAATCTGCGCCAAAAGCCAAAAAATCCGATAATAAGAAGACTGAAGGAAAAACTAAGAAGGTTGCTAGCATTAGCTTGTTGGGTTTGTTTTTCTTTATATTTCTTTTTGGTGGACTCGTTCCTCTAGTTAATGTTAAGTTTGGAGATATATGGGACAATGTTCCCAGGAGGCCCATCTCTGCTACTGATAGGTTCTATAGTCACCACGGAGGAAAAGCTTGGGAGGTTAATGGTCATATAAATACATCTGAAGGAGAAAAGGGAGTAAAATTCTCTAGCGGGAATTTGGGTATTTCCGACAGAACGTTATATGAGAAAGTTCGCAAATTAGAAGAAACACTGAGACAACAGGACTCACCATGTAGAATGAGCTCAGATGACTTTGTTCATAGAGGAAATACTAGTGACTCCGAGCCTCTTCTTGCTTCTCTGTATGTTCCAAGGAATGATAAGCTAGTGAAAATTGATGGAAACTTGATAATTCACTCTGTTCTGGCTACTGAAAAAGCCATGGCATCTGATACTGCTCATACAGAAAAGAATACGAGAGAAAATGGATTGATGATTTCTAAAAATTGGGATTCTGCACTGGCTATTCCTGACGTTGCAAGGAACAGCGGTCAACAACCTCACTCATATAGGAGCCCGCCTGAACAGCGGAAGGCTCTTGCCTCTGGTTCAGCTGAAACATTGAAGAACCATTTAAAGTCAACTGCGACTGATGGTAAAATGCAACAATGGTTTCGTGAAGGTCTTGCTGGGCCAATGTTGAGTTCTGGGATGTGCACGGAGGTTTTCCAGTTTGATGCTTCGCCAAAACCGGGAGCTATAGTTCCAGCATCATCAGTTGCAAATGTTTCTCCTGTTAACCGCCAGAATGATACAAGCATCAACAAGAGAAGGAATAGAAGGTTCCTTCACAAGCTGCCACGTTCCCTTGCCGGATCTGGTCTCAACACAAGTGAAGAACATGTTATGAGAAATTCCCAGAACGAGAACCTCCATGGTAATAAATCAACATCTTCCATGGTGGTTTCGGTCCTTGTTGATCCCAAAGAGGTGGGAGATGCTGACGTGGATGGTGTGATGAAGCCTAAATCACTTCCTCGGATTTTTGTGGTTGTGCTTATAGATAGTGTCAAGTATGTCACTTACTCGTGTGGCCTTCCACGAGCATCTCCCCATCTTGTGACTGCCTGA 2292 0.4555 MDPLFFSGNEHAMPSEAFASDLELAMELGTDGDFEISFDDLGDLHIPHETDDFLLSDGYAQPPGSHELNDHGKQLSYDNANSGSPDSDSSSGSGNRNPDVSEFLNTKSPESGSCERSVTHSLENSGDQNSPHSLHVKVSSFKSPDSDSCDRESSGGSISSQGSGNGGLGDSCADEVMKTSSPDSYSDDRDISSHGITHQNMKLEDMGKNCDLKRKKQQNEGNTEARTTKYRKSTVNTSQQSDLNAVDEEDGKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSSKVSFVMAENAALRQQLSGGGTCPPPAPGVYPHPPMAPMPFPWVPYAPYVVKPQGSQVPLVPIPRLKSQQSQSAPKAKKSDNKKTEGKTKKVASISLLGLFFFIFLFGGLVPLVNVKFGDIWDNVPRRPISATDRFYSHHGGKAWEVNGHINTSEGEKGVKFSSGNLGISDRTLYEKVRKLEETLRQQDSPCRMSSDDFVHRGNTSDSEPLLASLYVPRNDKLVKIDGNLIIHSVLATEKAMASDTAHTEKNTRENGLMISKNWDSALAIPDVARNSGQQPHSYRSPPEQRKALASGSAETLKNHLKSTATDGKMQQWFREGLAGPMLSSGMCTEVFQFDASPKPGAIVPASSVANVSPVNRQNDTSINKRRNRRFLHKLPRSLAGSGLNTSEEHVMRNSQNENLHGNKSTSSMVVSVLVDPKEVGDADVDGVMKPKSLPRIFVVVLIDSVKYVTYSCGLPRASPHLVTA 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5870g00002 763 MobiDBLite consensus disorder prediction 245 268 - -
Pral5870g00002 763 MobiDBLite consensus disorder prediction 358 381 - -
Pral5870g00002 763 Pfam bZIP transcription factor 249 310 IPR004827 GO:0003700|GO:0006355
Pral5870g00002 763 Coils Coil 275 295 - -
Pral5870g00002 763 MobiDBLite consensus disorder prediction 150 167 - -
Pral5870g00002 763 MobiDBLite consensus disorder prediction 181 195 - -
Pral5870g00002 763 Gene3D - 251 313 - -
Pral5870g00002 763 CDD bZIP_HY5-like 253 304 - -
Pral5870g00002 763 SUPERFAMILY Leucine zipper domain 252 310 IPR046347 GO:0003700|GO:0006355
Pral5870g00002 763 MobiDBLite consensus disorder prediction 56 268 - -
Pral5870g00002 763 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 32 760 - -
Pral5870g00002 763 MobiDBLite consensus disorder prediction 204 227 - -
Pral5870g00002 763 MobiDBLite consensus disorder prediction 228 244 - -
Pral5870g00002 763 FunFam bZIP transcription factor 49 251 313 - -
Pral5870g00002 763 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 250 310 IPR004827 GO:0003700|GO:0006355
Pral5870g00002 763 MobiDBLite consensus disorder prediction 569 592 - -
Pral5870g00002 763 MobiDBLite consensus disorder prediction 74 143 - -
Pral5870g00002 763 SMART brlzneu 248 312 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5870g00002 Pral-Chr5870 23966 35591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5870g00002 23 762 bZIP Transcription Factor Family AT2G40950 47.424 4.55e-159 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral5870g00002 bZIP_1 6.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5870g00002 K25783 - gmx:100127362 713.375