LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5869g00004	ATGGGAATCGAAATGGACTACAAAATCAAGACCACCACTTCACCCTCTTCCTCTTGCTCTCCTCCTCCTCCTCCACCTCTGCCTTCACAACCACAATCGCCGCCGTCTCCAGTGGTGGTTTCGCCTTGTGCCGCCTGCAAGATCCTCCGCCGTCGCTGCGTCGAGAAGTGTGTTCTGGCGCCTTACTTCCCGCCGACCGATCCGCTCAAGTTCACCATTGCTCATAGAGTCTTCGGAGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCACAAAGAGCAGATGCAGTGAGCAGCATGGTGTACGAAGCAAATGCGAGGATAAGGGACCCAGTGTATGGTTGTGCTGGAGCCATATGCCAGCTTCAGAAGCAAGTGAGCGAGCTGCAAGGTCAGCTAGCCAAGGCTCAAGCCGAGCTGGTCAACATGCAGTGCCAACAAGCCAACTTGGTGGCTCTCATTTGCATGGAAATGAGCCAATCTCACCCTGAGCCTCACTCCATGGTGGCGTCTCAGTCGGCTCAGCTGCCACCCCACGAAGATATGAGCTGCTTGTTAGATGACAACAGCATGAACAACCTCGGCTCGGCTTGGCCTTGGGAGCCTCTTTGGACATGA	624	0.5465	MGIEMDYKIKTTTSPSSSCSPPPPPPLPSQPQSPPSPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQGQLAKAQAELVNMQCQQANLVALICMEMSQSHPEPHSMVASQSAQLPPHEDMSCLLDDNSMNNLGSAWPWEPLWT	207

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5869g00004	207	Pfam	Lateral organ boundaries (LOB) domain	42	139	IPR004883	-
	Pral5869g00004	207	MobiDBLite	consensus disorder prediction	17	34	-	-
	Pral5869g00004	207	MobiDBLite	consensus disorder prediction	1	34	-	-
	Pral5869g00004	207	PANTHER	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	41	175	-	-
	Pral5869g00004	207	ProSiteProfiles	LOB domain profile.	41	142	IPR004883	-
	Pral5869g00004	207	Coils	Coil	121	148	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5869g00004	Pral-Chr5869	18964	20572	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5869g00004	38	207	AS2 family	AT1G07900	67.647	1.33e-77	229

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	LOB	Pral5869g00004		LOB	4.4e-41	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5869g00004	-		-	gmx:100806667	278.87