Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5868g00013 ATGGGGAGGAAAGGGAGTTGGTTTTCTTCAGTGAGGAAAGTTCTCGGTCCTCAGTCCAAGAACGATCAGGACAAAAAGCAGAAGTCAGATGAAGTAGGATATGACAAACACAAGGAAGCAGCTTTGCCAAATGAAGAAGCACAATCTGTTGTTCCTCCTGCTATTCCATCCAAAGAAGATATTAAATCAACTGGAGCAGAGAATGAGCATAGCAATTATGCTTATTCTCTGGCTCTTGCCACTGCTGCAGCAGCAGAGGCCGCTGTTGCTGCTGCTCAGGCTGCAGCAGAGGTTGTCCGTCTTACTAGTGTGTCCCGCTACCATCTAAAGTCGAAGGAAGACATGGCAGCTATCAAGATTCAGACGGCATTTCGAGGATATCTGGCAAGAAGAGCATTGCGGGGCTTGAAAGGTTTGGTGAGGCTGAAGAGATTGATACAGGGGAAATCTGTTAAACGACAAGCAGCTTCTACCTTACGATGCATGCAGACCCTCACACGATTGCAGTCTCAGGTCCATGAGAGGAGGGCTAGAACGTCAGAGGAGAACCAAGCTCTTCAGTGGCAGCTGCAGCAGAAACACGAAAAAGAACTTGAGAAGTTGCAAGCTGCTCAGACTGGTGAAGAATGGGATGATACAGCGCAATCAAAGGAGCAAATTGAAGCAAGACAGTCCAAAAGGCAAGAAGCTGCGGTTCGAAGGGAGAGAGCTCTGGCCTACGCATTTTCACGTCAGCAAAAGTGGAGGAACTCTTCAAAACCTGCAAATCCGACCACATTCACGGATCCAATCAACCCACACTGGGGTTGGAGCTGGCTAGATCGATGGGTTGTAACACAGCCAGGGGATATCCAAAGAGGTATGGTTCACAGTGGGCGTGCATCTGCAAAGAGCATGGCAAGCCAACCCTTGTCTGTTGGAGAAGTCACTAAACTGTACACTTCTCGCGGTCAAATCCATCACAGTAACAACAAGCCTTCTCCGGCTGGCCAACAAAAATCAAGCCGGCCCCCGAGTCATAGGTCGTCTTCAATCCCACTTCAGAAGGCCCCCTCTGTCTCATCTACTTCCAGCAGCAAAGTAAGGGCGCCAAGCCCAAAGACCGGTTCTTGGGGCCGTGATGATGACTTGAGGAGTGCAGTTAGTGCTCAGTCACAACGGTACCGAAGACATACTATTTCAGGTTCATCGTTCAGAGACGACGAAAGCTTTGCAAGTTCATCTGCCCTCTCTACTTGCACGGTTCCTACTAAGTCAGCTAAGGTCAAGTCCAGAATTGAGAGTCCATCAGGTAAAAATGGGACACCAGAGAAAGGATCCAATACGAAGAAGAGACTTTCCTTCACAGATTCCCCTGCTCGTTTGAGGAACCATTCTGGCCCTCTTAAGGTGGATCTTTTGGCTTCCAATAAGGATGCTGCTTCAGTCACTAAGAAGAAAGTTGCCAATAATGGTGGCAGGTAG 1464 0.487 MGRKGSWFSSVRKVLGPQSKNDQDKKQKSDEVGYDKHKEAALPNEEAQSVVPPAIPSKEDIKSTGAENEHSNYAYSLALATAAAAEAAVAAAQAAAEVVRLTSVSRYHLKSKEDMAAIKIQTAFRGYLARRALRGLKGLVRLKRLIQGKSVKRQAASTLRCMQTLTRLQSQVHERRARTSEENQALQWQLQQKHEKELEKLQAAQTGEEWDDTAQSKEQIEARQSKRQEAAVRRERALAYAFSRQQKWRNSSKPANPTTFTDPINPHWGWSWLDRWVVTQPGDIQRGMVHSGRASAKSMASQPLSVGEVTKLYTSRGQIHHSNNKPSPAGQQKSSRPPSHRSSSIPLQKAPSVSSTSSSKVRAPSPKTGSWGRDDDLRSAVSAQSQRYRRHTISGSSFRDDESFASSSALSTCTVPTKSAKVKSRIESPSGKNGTPEKGSNTKKRLSFTDSPARLRNHSGPLKVDLLASNKDAASVTKKKVANNGGR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5868g00013 487 Gene3D iswi atpase 109 137 - -
Pral5868g00013 487 SMART iq_5 112 134 IPR000048 GO:0005515
Pral5868g00013 487 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Pral5868g00013 487 MobiDBLite consensus disorder prediction 244 264 - -
Pral5868g00013 487 MobiDBLite consensus disorder prediction 1 64 - -
Pral5868g00013 487 MobiDBLite consensus disorder prediction 18 43 - -
Pral5868g00013 487 MobiDBLite consensus disorder prediction 318 487 - -
Pral5868g00013 487 MobiDBLite consensus disorder prediction 243 264 - -
Pral5868g00013 487 MobiDBLite consensus disorder prediction 379 454 - -
Pral5868g00013 487 Pfam IQ calmodulin-binding motif 115 134 IPR000048 GO:0005515
Pral5868g00013 487 MobiDBLite consensus disorder prediction 318 365 - -
Pral5868g00013 487 PANTHER IQ-DOMAIN 5-RELATED 1 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5868g00013 Pral-Chr5868 88888 92352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5868g00013 1 465 IQD Protein Family AT5G03040 41.983 1.19e-98 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5868g00013 - - tcc:18586349 469.544