Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5868g00012 ATGGGGAGGAAAGGGAGTTGGTTTTCTTCAGTGAGGAAAGTTCTCGGTCCTCAGTCCAAGAACGATCAGGACAAAAAGCAGAAGTCAGATGAAGTAGGATATGACAAACACAAGGAAGCAGCTTTGCCAAATGAAGAAGCACAATCTGTTGTTCCTCCTGCTATTCCATCCAAAGAAGATATTAAATCAACTGGAGCAGAGAATGAGCATAGCAATTATGCTTATTCTCTGGCTCTTGCCACTGCTGCAGCAGCAGAGGCCGCTGTTGCTGCTGCTCAGGCTGCAGCAGAGGTTGTCCGTCTTACTAGTGTGTCCCGCTACCATCTAAAGTCGAAGGAAGACATGGCAGCTATCAAGATTCAGACGGCATTTCGAGGATATCTGGCAAGAAGAGCATTGCGGGGCTTGAAAGGTTTGGTGAGGCTGAAGAGATTGATACAGGGGAAATCTGTTAAACGACAAGCAGCTTCTACCTTACGATGCATGCAGACCCTCACACGATTGCAGTCTCAGGTCCATGAGAGGAGGGCTAGAACGTCAGAGGAGAACCAAGCTCTTCAGTGGCAGCTGCAGCAGAAACACGAAAAAGAACTTGAGAAGTTGCAAGCTGCTACTGGTGAAGAATGGGATGATACAGCGCAATCAAAGGAGCAAATTGAAGCAAGACAGTCCAAAAGGCAAGAAGCTGCGGTTCGAAGGGAGAGAGCTCTGGCCTACGCATTTTCACGTCAGCAAAAGTGGAGGAACTCTTCAAAACCTGCAAATCCGACCACATTCACGGATCCAATCAACCCACACTGGGGTTGGAGCTGGCTAGATCGATGGGTTGTAACACAGCCAGGGGATATCCAAAGAGGTATGGTTCACAGTGGGCGTGCATCTGCAAAGAGCATGGCAAGCCAACCCTTGTCTGTTGGAGAAGTCACTAAACTGTACACTTCTCGCGGTCAAATCCATCACAGTAACAACAAGCCTTCTCCGGCTGGCCAACAAAAATCAAGCCGGCCCCCGAGTCATAGGTCGTCTTCAATCCCACTTCAGAAGGCCCCCTCTGTCTCATCTACTTCCAGCAGCAAAGTAAGGGCGCCAAGCCCAAAGACCGGTTCTTGGGGCCGTGATGATGACTTGAGGAGTGCAGTTAGTGCTCAGTCACAACGGTACCGAAGACATACTATTTCAGGTTCATCGTTCAGAGACGACGAAAGCTTTGCAAGTTCATCTGCCCTCTCTACTTGCACGGTTCCTACTAAGTCAGCTAAGGTCAAGTCCAGAATTGAGAGTCCATCAGGTAAAAATGGGACACCAGAGAAAGGATCCAATACGAAGAAGAGACTTTCCTTCACAGATTCCCCTGCTCGTTTGAGGAACCATTCTGGCCCTCTTAAGGTGGATCTTTTGGCTTCCAATAAGGATGCTGCTTCAGTCACTAAGAAGAAAGTTGCCAATAATGGTGGCAGGTAG 1461 0.4867 MGRKGSWFSSVRKVLGPQSKNDQDKKQKSDEVGYDKHKEAALPNEEAQSVVPPAIPSKEDIKSTGAENEHSNYAYSLALATAAAAEAAVAAAQAAAEVVRLTSVSRYHLKSKEDMAAIKIQTAFRGYLARRALRGLKGLVRLKRLIQGKSVKRQAASTLRCMQTLTRLQSQVHERRARTSEENQALQWQLQQKHEKELEKLQAATGEEWDDTAQSKEQIEARQSKRQEAAVRRERALAYAFSRQQKWRNSSKPANPTTFTDPINPHWGWSWLDRWVVTQPGDIQRGMVHSGRASAKSMASQPLSVGEVTKLYTSRGQIHHSNNKPSPAGQQKSSRPPSHRSSSIPLQKAPSVSSTSSSKVRAPSPKTGSWGRDDDLRSAVSAQSQRYRRHTISGSSFRDDESFASSSALSTCTVPTKSAKVKSRIESPSGKNGTPEKGSNTKKRLSFTDSPARLRNHSGPLKVDLLASNKDAASVTKKKVANNGGR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5868g00012 486 MobiDBLite consensus disorder prediction 317 465 - -
Pral5868g00012 486 MobiDBLite consensus disorder prediction 242 263 - -
Pral5868g00012 486 MobiDBLite consensus disorder prediction 378 453 - -
Pral5868g00012 486 SMART iq_5 112 134 IPR000048 GO:0005515
Pral5868g00012 486 MobiDBLite consensus disorder prediction 317 364 - -
Pral5868g00012 486 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Pral5868g00012 486 MobiDBLite consensus disorder prediction 1 64 - -
Pral5868g00012 486 MobiDBLite consensus disorder prediction 243 263 - -
Pral5868g00012 486 Gene3D iswi atpase 109 137 - -
Pral5868g00012 486 PANTHER IQ-DOMAIN 5-RELATED 1 460 - -
Pral5868g00012 486 Pfam IQ calmodulin-binding motif 115 134 IPR000048 GO:0005515
Pral5868g00012 486 MobiDBLite consensus disorder prediction 18 43 - -
Pral5868g00012 486 MobiDBLite consensus disorder prediction 204 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5868g00012 Pral-Chr5868 88885 92352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5868g00012 1 464 IQD Protein Family AT5G03040 42.072 7.04e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5868g00012 - - tcc:18586349 473.396