Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5867g00006 ATGGAGTCAAAAGGAGTTCAAATCCTCGGAATTTGGGGCATGAGTGGTATCGGTAAAACAGCCATTGCACGAGTTGCATTTGAGAAATTCTCTTCCCGCTATGAAGGCTCTTACTTTTTAGACAATGTGAGAGAAGAATCACAAAAGCATGGGCTGAAATCTTTAAGAGAGAAACTTATTTCTAAACTGCAAGAGGAAAAATCCACTTTCATATGTAGAAAGCTCATTAGACGAAGAAAAGTTTTTGTCGTGCTTGATGATGTGGGTTCTTCAGAACAACTACAGCATTTGGTTACAGATGGAATTCATTGGGGACCTGGTAGTAGATTCATTGTAACAAGCAAAGACAAGCAAGTGCTAACTGCTGGAGGAGTTCATTCCATACATGAGGTCAAGGAATTGGGCCCTAAAGAATCTCTTAAGCTTTTCAGCTTAAATGCCTTCAAAAAAAGCCATCCTAAAAAGGGATATGAGGAACTTTCAAAAAGGGCAATTGGTTATGCCAAGGGCCTTCCTCTGGCTTTAAGAGTTGTGGGTTCATCTCTTTGTTCTGGAGATAGAGGAACATGGGAAAGTACATTGAGAAAACTTGAGAGGTACCCTCATCCTCAAATTCAAGATGTGTTGAAAACGAGCTATGATGGATTAGATGATGTGCTAAGGGACGACTTTTAG 675 0.4015 MESKGVQILGIWGMSGIGKTAIARVAFEKFSSRYEGSYFLDNVREESQKHGLKSLREKLISKLQEEKSTFICRKLIRRRKVFVVLDDVGSSEQLQHLVTDGIHWGPGSRFIVTSKDKQVLTAGGVHSIHEVKELGPKESLKLFSLNAFKKSHPKKGYEELSKRAIGYAKGLPLALRVVGSSLCSGDRGTWESTLRKLERYPHPQIQDVLKTSYDGLDDVLRDDF 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5867g00006 224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 224 IPR027417 -
Pral5867g00006 224 Gene3D - 1 126 IPR027417 -
Pral5867g00006 224 FunFam Disease resistance protein (TIR-NBS-LRR class) 136 217 - -
Pral5867g00006 224 Gene3D - 134 217 IPR042197 -
Pral5867g00006 224 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 218 IPR044974 GO:0006952
Pral5867g00006 224 Pfam NB-ARC domain 2 219 IPR002182 GO:0043531
Pral5867g00006 224 PRINTS Disease resistance protein signature 75 89 - -
Pral5867g00006 224 PRINTS Disease resistance protein signature 168 182 - -
Pral5867g00006 224 PRINTS Disease resistance protein signature 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5867g00006 Pral-Chr5867 110824 111598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5867g00006 6 224 WRKY Transcription Factor Family AT5G45050 35.841 1.69e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5867g00006 - - pcin:129311144 237.269