Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5867g00004 ATGGAATCAAAAGGAGTTCAAATCCTCGGAATTTGGGGCATGAGTGGCATCGGTAAAACAGCCATTGCACGTGTTGCATTTGAGAAATTCTCTTCCCGCTATGAAGGCTCTTACTTTTTAGACAATGTGAGAGAAGAATCACAAAAGCATGGGCTGAAATCTTTAAGAGAGAAACTTATTGCTGAACTGCAAGAGGAAAAATCCACTTTCATCCGTAGAAAGCTTATTAGACGAAGAAAAGTTTTAGTTGTGCTTGATGATGTGGATGCTCCAGAACAACTACGGCATCTAGTTACAGAAGGATTTCACTGGGGACCTGGTAGTAGAGTTATTGTAACAAGCCAAAACAAGCAAGCACTGATTGCTGGAGGAGTTCCTGCCAATTTCATACATGAGGTCAAGAAATTGGACTTTGAAGAATCCCTTAATCTTTTCAGCTTAAATGCCTTCAACAATAGCCATCCCGGAAGGGGATACAAAGAACTTTCAAAACAGGCTGCTGCTTATGCCGATGGCCTTCCTCTAGCTCTAAAAGTTTTGGGCTTACATCTTTGTTCTTGTGATAGAGAAACATGGAAAAGTACATTGGGAAAACTTGAGATGTATCCCCATCCTCAAATTCAAGATGTGCTAAAAATGAGTTTTGAGGGATTAGATGATGTAGAAAGGGACATATTTCTTGACATCGCTTTCTTCTACAAAGGAGAAGATAAAGATCATGTCAAGAGGCTACTTGATGCCAATAACCTTTTTGCTGCTGACGGAATAAAAGGACTTCTGGATAAAGCTCTTATATCCATTTCAAATGACAATGTAATACAAATGCATGACTTAATTCAAGAAATGGGTTGGGAAATAGTTCGGCAAGAATGCAAGGAAAATCCTGGAAGACGTAGTCGGTTGAAGGACTTTGAGGAAGTGTATGATGTGTTAAAAAATAATAAGGGAACTGATGCCATTAAAGGCATAGCGTTATATGCTTCTCTCTTTAAAGATGTACGGTTGAATGTTGACACCTTCAAAAATATGACTAATCTCAGAGTCGTCAAGTTTTACTCTTCTTGGCATGTGAGATGCTGTAATGTGCACCCTCCAACAAGTTTTTTGTCGTTCTCTGATGAGCTGAGGCGCCTAAAGTGGGATGGATACCCACACCCATATCCTGAGAAACTTGTTGGGCACTCTATGCCCAACAACCATGTTGGGAAACTTTGGAAACTAGTGCAGGATTATGTGAATTCTAAGAGAATGAGCCTTGACAGCTCCAAACAATCAATGGAGTTGCTTGATTTCACAAAGGCACAGAAAACTGAATGGGAGGATATGTGTTCTTGTCAAGGTTTTTGTAACGTCAATTCACATATCCTGTCTCTTTCCATGATTGCTGCTGTGAATTTAGTTCGCTCCAAAGATTCAAAGAAACATCACAGTGAGAGTAATTTCAGATCTCTTATAAACTTTGATGTCGGTTTATGCTTTAGTGTCAGGGTATTTTCGTCGTCATCAAAAGAAATATCAGAGCTGGATTTTGTAACTTCAAAATTTGAAATATTGTGCTCATCATCAGTTAGGGGTGTCAGTGAGCTAAGAAGGATCACACATGGTGATTCAAGACCAGAGATTGTTCCCCTAAATGAGTTGTGTTGCCTGAGATTTTTTGAAGAGCTTAGTCTCTCTGATTGCAGACAAATGAATCAAAGCCCAGAGCTGCGCATCCTATTTGACGCCTTACTTTATTTACGAGAGCTATTTATGAATGGATGCAGCGTCTTCTTTAAATCCCCTCATACTATTTGCACCTCTTCATCATTTAATTATTTGACGGATCTATGTATACAACAAAGTCAGGCACCAGCGCGGCATTTTGCCTCATTTCCCCTCAAGTCAGGGGAGCTTGTACTCGTCACGGTAGCATTTAAACGGGCAGTGGATCTTTTGGCTTTGTCTGGGCATGTCCTTTACGATCATGATTCCTCTTGTGCGATAGGGAAGGTGAACGGAAACCAATTCTTTATTAGAGGACCATATATATCAAGGAGCCTGATTCGGTGTCCATCAGTATCATCATGGTTGAGGTAA 2079 0.4021 MESKGVQILGIWGMSGIGKTAIARVAFEKFSSRYEGSYFLDNVREESQKHGLKSLREKLIAELQEEKSTFIRRKLIRRRKVLVVLDDVDAPEQLRHLVTEGFHWGPGSRVIVTSQNKQALIAGGVPANFIHEVKKLDFEESLNLFSLNAFNNSHPGRGYKELSKQAAAYADGLPLALKVLGLHLCSCDRETWKSTLGKLEMYPHPQIQDVLKMSFEGLDDVERDIFLDIAFFYKGEDKDHVKRLLDANNLFAADGIKGLLDKALISISNDNVIQMHDLIQEMGWEIVRQECKENPGRRSRLKDFEEVYDVLKNNKGTDAIKGIALYASLFKDVRLNVDTFKNMTNLRVVKFYSSWHVRCCNVHPPTSFLSFSDELRRLKWDGYPHPYPEKLVGHSMPNNHVGKLWKLVQDYVNSKRMSLDSSKQSMELLDFTKAQKTEWEDMCSCQGFCNVNSHILSLSMIAAVNLVRSKDSKKHHSESNFRSLINFDVGLCFSVRVFSSSSKEISELDFVTSKFEILCSSSVRGVSELRRITHGDSRPEIVPLNELCCLRFFEELSLSDCRQMNQSPELRILFDALLYLRELFMNGCSVFFKSPHTICTSSSFNYLTDLCIQQSQAPARHFASFPLKSGELVLVTVAFKRAVDLLALSGHVLYDHDSSCAIGKVNGNQFFIRGPYISRSLIRCPSVSSWLR 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5867g00004 692 PRINTS Disease resistance protein signature 75 89 - -
Pral5867g00004 692 PRINTS Disease resistance protein signature 548 564 - -
Pral5867g00004 692 PRINTS Disease resistance protein signature 8 23 - -
Pral5867g00004 692 PRINTS Disease resistance protein signature 170 184 - -
Pral5867g00004 692 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 589 IPR044974 GO:0006952
Pral5867g00004 692 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 229 IPR027417 -
Pral5867g00004 692 SUPERFAMILY "Winged helix" DNA-binding domain 206 311 IPR036390 -
Pral5867g00004 692 Gene3D - 135 219 IPR042197 -
Pral5867g00004 692 Gene3D - 1 122 IPR027417 -
Pral5867g00004 692 SUPERFAMILY L domain-like 274 610 - -
Pral5867g00004 692 Gene3D Ribonuclease Inhibitor 326 626 IPR032675 -
Pral5867g00004 692 Pfam NB-ARC domain 2 200 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5867g00004 Pral-Chr5867 61618 88014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5867g00004 1 569 WRKY Transcription Factor Family AT4G12020 31.535 4.00e-64 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5867g00004 - - pcin:129289344 471.085