Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5864g00001 ATGGCCGAAGGCTGGGATCTCTCCGCCGTCGTCCGAGGTTGCAGATCCTCCTCCCCTTCCTCCGCCACTGCCGCCGCCAGCACCACTACTACTTCCATTACGACACCGTCGTCTTCTTCATCCAAGGACCTTTCTTTACCATTAATCAAGGAAGAAAATGACATCTTCTCTTTCCCCAGTTTGACACAACAGAACCAGTGGATCCACCCCTTTATCCCCACCACCACCAAAACCACCACTATCTCTACTAGTGGTTGTGGCATATATCCCAATTCCTCTTTTACTGATTTTGCAGGCGAAGGGTCCAGTAGTTGTACCAATAATAATAATATAGATACTGCATCATCATCATCATCATCACTTGTTGCTTCTGGTTCTTATGCTTCTCATATTAGGCCTCATTTTATGCCTCAAGCCTCGCCCGCCTCCACTTCTTCTTCTTCTGGCTTTCAAAGATTCCATGACCAACATGTACAGCAACTCCAACAACACTCAAATTCAAATCAACTACAATTAGTTCATCAGAAACAGCAATTTCAAAAACCACCAAATCAGATCAGCGGTGCAATCAGATCGAGAAAAAGAAAGAGTCAACAGAAAAGAATGGTTTGCCATGTAACAGCTGAAAACCTCACCGCAGATTCGTGGGCCTGGAGAAAATACGGCCAAAAGCCTATTAAAGGCTCCCCGTACCCACGGAACTACTATAGATGTAGCAGTTCAAAAGGTTGTGGGGCCCGGAAGCAAGTAGAACGGAGCAACACTGAACCAGATATGTTCATCGTCGCGTACACCGGAGAACACACGCATCCGAGACCCACCCATCGGAACTCGCTCGCCGGAAGTACTAGGAACAAACCGTCAACGACGACCCGTCAACCCGCCTCTCATGAATCTGGATCACCAAGCACGATCGCAAACCGGGCATCGTCATCTTCACAGCTTTCGCCGACGACGCCTTTAATGGCGGTGGCTACGAAAGACGAGTGCGCCGATGAACCCATGTTAAGCAATGAAGCCACTAGCCCTTTTCCAGAAGATGAGTTTGACTTGGCCTCTCATGATGACATTTTGATTCCGAACATGGCGGCCATGATGGATAAGTTCTTGCTGGGTGCTGGTGAGCTTCACAGCGCAATCGGACTTAGTGGCGGTGGGGGTACTAGCACAAGCGGCAATTCGGTGGATGGGTCGCACCAAAATGTTGAACCCGGCTTGGCTCCGAATCTACAACAGCAGTTCTCCCCTCTCAGCCGGTCTAGCCCTGGTTGA 1272 0.4929 MAEGWDLSAVVRGCRSSSPSSATAAASTTTTSITTPSSSSSKDLSLPLIKEENDIFSFPSLTQQNQWIHPFIPTTTKTTTISTSGCGIYPNSSFTDFAGEGSSSCTNNNNIDTASSSSSSLVASGSYASHIRPHFMPQASPASTSSSSGFQRFHDQHVQQLQQHSNSNQLQLVHQKQQFQKPPNQISGAIRSRKRKSQQKRMVCHVTAENLTADSWAWRKYGQKPIKGSPYPRNYYRCSSSKGCGARKQVERSNTEPDMFIVAYTGEHTHPRPTHRNSLAGSTRNKPSTTTRQPASHESGSPSTIANRASSSSQLSPTTPLMAVATKDECADEPMLSNEATSPFPEDEFDLASHDDILIPNMAAMMDKFLLGAGELHSAIGLSGGGGTSTSGNSVDGSHQNVEPGLAPNLQQQFSPLSRSSPG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5864g00001 423 MobiDBLite consensus disorder prediction 172 192 - -
Pral5864g00001 423 Pfam WRKY DNA -binding domain 214 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5864g00001 423 MobiDBLite consensus disorder prediction 172 202 - -
Pral5864g00001 423 MobiDBLite consensus disorder prediction 384 423 - -
Pral5864g00001 423 MobiDBLite consensus disorder prediction 265 318 - -
Pral5864g00001 423 SMART WRKY_cls 212 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5864g00001 423 SUPERFAMILY WRKY DNA-binding domain 206 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5864g00001 423 Gene3D WRKY domain 196 274 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5864g00001 423 ProSiteProfiles WRKY domain profile. 207 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5864g00001 423 FunFam WRKY transcription factor 22 195 266 - -
Pral5864g00001 423 MobiDBLite consensus disorder prediction 275 318 - -
Pral5864g00001 423 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 376 IPR044810 GO:0003700
Pral5864g00001 423 MobiDBLite consensus disorder prediction 14 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5864g00001 Pral-Chr5864 29824 31566 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5864g00001 191 340 WRKY Transcription Factor Family AT5G52830 64.901 4.95e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5864g00001 WRKY 1.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5864g00001 - - pcin:129285324 499.975