Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5862g00011 ATGCAGAACTTAATCAGGGAGCTTAAGGAAGTCGGAGGCACCTTATTTGATGAGCAACAGATTCAAGCTGTCATGAGATCTCTCCCAGCAAGTTGGGATACCATGAAGCACACAATTACTCATAACGAGAGTATAAAAACCTTTGCTGATGTAGCTCGCCACCTCCAACTGGAGGATGACCGAATGGAAACTGTGAAACCTATCAACTCAGGGGCCACAGACCACGTGAGCAAGGATCATGGCAACTTCACAGAATTTCGTCGAATCATCATAACAAATAGAGATGAGAAAATCCTTGATAGGCATGGAGTGGATAAAGTTTACAAGATTGAACTGCTGAACGGCGAAGAAGCTGCCCAACATCTTAGTAGAAGAGCATTTAGAAGTGATGATCCTAATAATGAATTTGAAGAGTTGAGTCATAGACTTCTACAATATGCTAAAGCACTTCCATTAGCAATCAAAGTGTCAGGTTCCTCTTTGTTTAAGCTCCAACAATCAGAGTGGGAAGCACAAGTAGATAGATTGAAAGAAAATCCCAACCAAGAGGAAGACTGA 558 0.4176 MQNLIRELKEVGGTLFDEQQIQAVMRSLPASWDTMKHTITHNESIKTFADVARHLQLEDDRMETVKPINSGATDHVSKDHGNFTEFRRIIITNRDEKILDRHGVDKVYKIELLNGEEAAQHLSRRAFRSDDPNNEFEELSHRLLQYAKALPLAIKVSGSSLFKLQQSEWEAQVDRLKENPNQEED 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5862g00011 185 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 182 IPR027417 -
Pral5862g00011 185 Gene3D - 112 184 IPR042197 -
Pral5862g00011 185 Pfam NB-ARC domain 17 179 IPR002182 GO:0043531
Pral5862g00011 185 Pfam gag-polypeptide of LTR copia-type 1 63 - -
Pral5862g00011 185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 46 177 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5862g00011 Pral-Chr5862 160663 166432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5862g00011 89 180 WRKY Transcription Factor Family AT5G45050 33.333 3.51e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5862g00011 - - pcin:129315185 152.91