LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5862g00006	ATGGGTCCAAGCAATAATGTTGACTATGGAATGCCAGTTACATGGGAATCACCTCAGAGCGAAAGGAAAATGAAAGGAGCAATGATGAGCAAAATTGCTAGAAACATAAGAAAACAGGCCAGACAGAGAACTAGAAGCTCAACTTCTAGGGTTTCTTCTTCAATCTTGGAACAGGCAAGCAAGGTTGATTTACTTAAAAGCATGGAGGAGATTGTTCATAAGAATGAAATTCATAGTAGAATCCCCAATATTCTTCACTCTCTTGATGGGAAGAGACTCAAAAAATTGTTGACGAAGAAGTTGAAAACCAGTGATGTTGGCTTTGTGGGTCGCATTGTCCTTCCAAAGAAGGAAGCTGAGAAGAACCTTCCGGCTCTTTCCAACAAGGAAGGCATTGAAGTATTACTTAAGGATGAGCAAGCACCAGAAGTTTCTGACTATAAGCAGCTCTTATCAAACAAGGAGGAAGAAAAACATGACAACTCAAACAACAATAACTACATTGAAATGCCATACCAACAAAAGAAAGACGATGATGAAGAGGAAACATGTTTGGGAGAGTTAATCGATGAGCTATTCAACCAAAAGGACGAAGAATCTTCAAACAAGCTCTCAACCATGTACAACGTCGAAGGCTCATCATCAAATACTGAAGAAGTTCTGTACAATGGTAATGCATCACAAGAGGTATCACCCAATGGAACAGTGGCCCCCACATTATCCTCTTCCTTCCAGGATGACTTGGACGATTTCTTTGAAGGACTTGACATGTCACAATTCGGGTGTAATGACTTTGTTCTAGATGAGCAACAATTTGTAGATGCATGA	828	0.401	MGPSNNVDYGMPVTWESPQSERKMKGAMMSKIARNIRKQARQRTRSSTSRVSSSILEQASKVDLLKSMEEIVHKNEIHSRIPNILHSLDGKRLKKLLTKKLKTSDVGFVGRIVLPKKEAEKNLPALSNKEGIEVLLKDEQAPEVSDYKQLLSNKEEEKHDNSNNNNYIEMPYQQKKDDDEEETCLGELIDELFNQKDEESSNKLSTMYNVEGSSSNTEEVLYNGNASQEVSPNGTVAPTLSSSFQDDLDDFFEGLDMSQFGCNDFVLDEQQFVDA	275

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5862g00006	275	SUPERFAMILY	DNA-binding pseudobarrel domain	96	139	IPR015300	-
	Pral5862g00006	275	PANTHER	B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3	38	139	IPR044800	GO:0003700
	Pral5862g00006	275	MobiDBLite	consensus disorder prediction	1	22	-	-
	Pral5862g00006	275	Gene3D	-	86	168	IPR015300	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5862g00006	Pral-Chr5862	79765	81823	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5862g00006	87	138	B3 DNA Binding Superfamily	AT1G28300	59.615	3.66e-13	67.0

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5862g00006	K09287		-	gmx:102662409	75.8701