Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5862g00002 ATGCCTCATTCCAACACCGCTAACAACTTCTTCACCCTTACCATGACGTCCATGGCCATGGCTTCCCACAAAATTTTGTTGCTCTTGCTTATCAGCTTCCTCTTTTCTCGTACAACTGAGGCACAGGTCACTTATCTTTACCACAACTGCTCTTCCAACAAAACCTTCACTGTCAATAGTGCTTTTCAATCGGACCGAATCAAACTCCTCTCTTCCTTAGCTTCTGCCAACACTGACTTCTCCAACGCCACCGTCATCGGCGGCGGCGACACCATCTATGGCCTCTTCATGTGCCGGGGTGACGTCAACCTCTCGATATGCCACCAATGTGTCGTGAACGCCACCCAACGATTATCTTCCGAGTGCAGAGTTTCGAAGGAGGCAATCATCTGGTACGACGAGTGCATGGTTCGCTATTCGAACCGTTCCTTCTTCGCCACCGTAGACACAAGGCCTAGACTCGGCCTCTTGAACACCGGCAATGCCACCCGGCCGAGCTTCTTACAGTTATTGTGGGACACGCTTAACTTTACGGCAGACGATGCAGCCAACGACGCTAAGAAATATGCCACAAGGCAAGCAAGCATATCTGGATACGGAACTATGTATTCTCTACTTCAGTGCACGCCTGACCTATCATCCCAAGATTGCAGAAAATGTCTGAGTGCTGTGATTGGAGACCTTTCATGGTGCTGTGTGGGAAAACAAGGAGGAAGAGTTCTATATCCCAGCTGCAACGTTCGCTATGAGTTCTATCCTTTCTATAATAACTCTGATGATCAGCCAGAAGCGACGACGCCTACACCGCCTGCGCTCCCTCCTCCAACAAATTCTCCAGATCCTCGAGTAAAAGGGAAAGGTCAGTCAACAAGCACTATTGTGATAGTTGTGGTTTCTTTTGTTGGTGGTCTGGGGATATTTCTTTGTGTCGCCTACTATCTCTCAAAGAGTCTAATCAAGAAGAGACGCAGCGCTCTTCTCAGACAAAAATACTTTGGAAATGAAGGCAATAATTTAGAGCCTCTACAATTTAGTTTGGCCACTATTGAAGCTGCAACAAATAAGTTTTCGCATGAAAAATGTTTAGGCCAAGGTGGATTTGGACAAGTTTACAAGGGTGTTCTTTCAAATGGTCAAGAAATAGCTGTCAAGAGACTTTCAAAAAATTCTTGTCAAGGTGGAGAAGAATTCAAGAATGAGGTTTTATTGATTGCCAAACTTCAACACAGAAATTTGGTGGCCTTGCTTGGATTTTGCATAGAAGAACAAGAGAAAATCCTCGTTTATGAATATGTTCCGAACAAAAGCCTCGACTACTTTCTATTTGGCTCCCAAAAAGGCAAAGTATTAAATTGGGTTGAGCGTTGTAAAATCATTGGAGGAGTTGCTCGAGGAACTCTTTATCTTCATGAATATTCTCGTCTCAAAATTATACATCGTGATCTCAAACCAAGCAATATTTTATTAGATGATGAAGTGAATCCAAAAATCTCAGATTTTGGATTAGCTAAAATGGTTGCTATCAACACAAATGAAGGAAGTACAAATAGAATAGTTGGGACATATGGTTATATGTCTCCAGAATATGCAATGTACGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTCATAATGTTAGAGATTATCAGTGGAAAGAAGAATACAAGTCGTCATAGCCAATCACAGCATGCTGATGGCCTATTGAGCTATGCCTGGAAGCAATGGAAGGAGGAAAAGTTGCTGGAGATATTAGATTCGAATATAAAAGAATTTGGATCATATAATGAAGTGATCAAGTGCATCCAGATTGGCTTGTTATGTGTTCAAGAAGATCCAGATACAAGACCCACAATGGCTGCGGTTGTTTCCTATCTTAGTAATGATTCCATTCAGCTGCCATTGCCAGAGGAACCTGCATTCTTTCTAGACGGTAGAATGGGGCCCAGTACCAGTGGAAGTAAGGAATCAGGCTCGACCATTGAAGTGTCTATGAGTGAATTCTTTCCTCGTTAA 2022 0.4283 MPHSNTANNFFTLTMTSMAMASHKILLLLLISFLFSRTTEAQVTYLYHNCSSNKTFTVNSAFQSDRIKLLSSLASANTDFSNATVIGGGDTIYGLFMCRGDVNLSICHQCVVNATQRLSSECRVSKEAIIWYDECMVRYSNRSFFATVDTRPRLGLLNTGNATRPSFLQLLWDTLNFTADDAANDAKKYATRQASISGYGTMYSLLQCTPDLSSQDCRKCLSAVIGDLSWCCVGKQGGRVLYPSCNVRYEFYPFYNNSDDQPEATTPTPPALPPPTNSPDPRVKGKGQSTSTIVIVVVSFVGGLGIFLCVAYYLSKSLIKKRRSALLRQKYFGNEGNNLEPLQFSLATIEAATNKFSHEKCLGQGGFGQVYKGVLSNGQEIAVKRLSKNSCQGGEEFKNEVLLIAKLQHRNLVALLGFCIEEQEKILVYEYVPNKSLDYFLFGSQKGKVLNWVERCKIIGGVARGTLYLHEYSRLKIIHRDLKPSNILLDDEVNPKISDFGLAKMVAINTNEGSTNRIVGTYGYMSPEYAMYGQYSEKSDVFSFGVIMLEIISGKKNTSRHSQSQHADGLLSYAWKQWKEEKLLEILDSNIKEFGSYNEVIKCIQIGLLCVQEDPDTRPTMAAVVSYLSNDSIQLPLPEEPAFFLDGRMGPSTSGSKESGSTIEVSMSEFFPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5862g00002 673 SUPERFAMILY Protein kinase-like (PK-like) 339 646 IPR011009 -
Pral5862g00002 673 MobiDBLite consensus disorder prediction 260 287 - -
Pral5862g00002 673 MobiDBLite consensus disorder prediction 651 673 - -
Pral5862g00002 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Pral5862g00002 673 MobiDBLite consensus disorder prediction 266 280 - -
Pral5862g00002 673 FunFam Cysteine-rich receptor-like protein kinase 10 319 431 - -
Pral5862g00002 673 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Pral5862g00002 673 ProSiteProfiles Protein kinase domain profile. 356 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5862g00002 673 Gene3D - 154 254 IPR038408 -
Pral5862g00002 673 Gene3D - 41 144 IPR038408 -
Pral5862g00002 673 Gene3D Phosphorylase Kinase; domain 1 317 431 - -
Pral5862g00002 673 FunFam cysteine-rich receptor-like protein kinase 10 432 635 - -
Pral5862g00002 673 FunFam Cysteine-rich receptor-like protein kinase 25 152 254 - -
Pral5862g00002 673 ProSiteProfiles Gnk2-homologous domain profile. 44 144 IPR002902 -
Pral5862g00002 673 MobiDBLite consensus disorder prediction 652 666 - -
Pral5862g00002 673 SMART serkin_6 356 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5862g00002 673 CDD STKc_IRAK 362 628 - -
Pral5862g00002 673 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 43 143 - -
Pral5862g00002 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 656 - -
Pral5862g00002 673 Pfam Protein kinase domain 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5862g00002 673 Gene3D Transferase(Phosphotransferase) domain 1 432 635 - -
Pral5862g00002 673 ProSiteProfiles Gnk2-homologous domain profile. 149 254 IPR002902 -
Pral5862g00002 673 Pfam Salt stress response/antifungal 50 141 IPR002902 -
Pral5862g00002 673 Pfam Salt stress response/antifungal 171 251 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5862g00002 Pral-Chr5862 29243 32484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5862g00002 33 673 Receptor kinase-like Gene Family AT4G05200 45.865 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral5862g00002 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5862g00002 - - pcin:129286093 824.313