Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5861g00008 ATGGTTGGAAGCCTTGAAATTGGAGCCGTACCATTCAATCCAGACGGATGGGGTCCGCCTGACGCCGCCGCATCGTCTGCCAGCAACCTCCCGGCGAATGTACCCTACGCCCCGTTCTCTCGCTCGGACAAACTGGGTCGAATTGCTGACTGGACCCGCAACTTCAACAACCCGACAAGACAAAAGAACCCGGCTGACGCCGTATTCGACTTCACCATCGACGATTCGTTCCCTGCCTCCGCCGATGATGATTCCTCCTTCCGCCTCGTCGATGGAAAGCCCCCTCCACGACCCAAGTTTGGTCCTAAATGGCGGTTCAACCAGCAGCGGCAGCTCCCTCAGCGCCGTGACGAGGAGGTGGAGGCCCGAAAACGTGAGGCTGAGAAGGAGAGGGCACGCCGTGACCGGCTCTACTATCTCAACAGATCCAACGCTAATGCCCAACGTCGTGAAGCCGCGATCTTCAAATCCTCTGTGGATATTCAGCCCGAATGGAACATGTTGGACCAGATACCGTTTTCAACTTTCTCAAAGCTGTCATTCGCTGTTCCTGAACCCGAAGACCTTCTTTTCTGTGGTGGTCTCGAGTACTATGACAGGTCGTATGATCGAACCACTCCAAAGAATGAACGTCGTCTTGAGAGGTTTAAGAATAGGAACTTTTTCAAAGTTACTACCACTGATGACCCAGTGATCAGAAGGCTTGCTAACGAGGACAAAGCGACGGTTTTCGCCACTGATACTATTCTCTCAACACTCATGTGCTCGCCCAGGTCTGTTTACTCATGGGATATTGTTATTCAGCGAGTTGGGAACAAGCTGTTTTTTGATAAGAGGGATGGATCACAGTTGGATTTGCTGTCCGTCCACGAGACCTCGCAGGAACCACTGCCTGAGGCTAAGGATGATATTAACTCAGCCCACTCATTGAGCGTTGAGGCAGCGTATATTAATCAGAATTTTTCGCAACAAGTTTTAATCAGAGATGGGAAAAAGGTGACTTTTGATGAGCCTAATCCTTTTGCAAATGAGGGTGAGGAGGTTGCTTCTGTGGCATATAGGTATAGGAGGTGGAAGCTTGATGATGACATGTATCTCGTTGCGAGGTGTGAAGTTCAGAGTGTTGTTGATATGAACAACCAGAGGTCCTTCCTTACTTTGAATGCATTGAATGAATTTGATCCCAAATATTCTGGCGTTGATTGGAGACAGAAGTTGGAGACACAGAGGGGTGCAGTCTTGGCGACAGAGCTGAAGAATAACGCAAATAAGTTGGCTAAGTGGACTGCTCAAGCTCTGTTGGCAAGTGCAGATATGATGAAGTTGGGTTACGTCTCTCGTGTCCATCCCCGTGATCATTTCAATCATGTGATTTTGGCTGTAAATGGTTATAAACCCAGAGATTTTGCGACTCAAATTAATTTGAACACATCTAATATGTGGGGAATTGTGAAGTCTATTGTGGACTTGTGCATGAAATTGAATGAGGGTAAGTATGTTTTGGTGAAGGATCCATCTAAGCCTCAAGTAAGGATATATGAGGTTCCAGCTGATGCATTTGAGAATGACTATGTGGAGGAGCCACTACCTGAGGAAGAACAAGTTCAACCTCCAACAGAGGGTGGTGATGGTGGGGAGGCAACTACCACAAGTAATGTTGTGGAAGACAAGCAGATTGATGGTCAAGCTTAG 1692 0.4799 MVGSLEIGAVPFNPDGWGPPDAAASSASNLPANVPYAPFSRSDKLGRIADWTRNFNNPTRQKNPADAVFDFTIDDSFPASADDDSSFRLVDGKPPPRPKFGPKWRFNQQRQLPQRRDEEVEARKREAEKERARRDRLYYLNRSNANAQRREAAIFKSSVDIQPEWNMLDQIPFSTFSKLSFAVPEPEDLLFCGGLEYYDRSYDRTTPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDTILSTLMCSPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGKKVTFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVVDMNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVNGYKPRDFATQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEEEQVQPPTEGGDGGEATTTSNVVEDKQIDGQA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5861g00008 563 Coils Coil 115 135 - -
Pral5861g00008 563 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 537 IPR007783 GO:0003743|GO:0005737|GO:0005852
Pral5861g00008 563 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 526 IPR007783 GO:0003743|GO:0005737|GO:0005852
Pral5861g00008 563 MobiDBLite consensus disorder prediction 82 104 - -
Pral5861g00008 563 MobiDBLite consensus disorder prediction 543 563 - -
Pral5861g00008 563 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 9 514 IPR007783 GO:0003743|GO:0005737|GO:0005852
Pral5861g00008 563 PIRSF Transl_init_eIF3d 1 544 IPR007783 GO:0003743|GO:0005737|GO:0005852
Pral5861g00008 563 MobiDBLite consensus disorder prediction 524 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5861g00008 Pral-Chr5861 143494 150269 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5861g00008 4 563 Eukaryotic Initiation Factors Gene Family AT4G20980 78.705 0.0 929
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5861g00008 K03251 - gmx:100799613 977.622