Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5861g00005 ATGATCAAACTCAAACACCGTCCACCCTGTTTCTTCCCTCTTCTTCTTCTTATTCTGATCTTCTCCTTCTCTGATTCATCTCTCGCCGTCGATTTCATCTTCAACGGCTTTAACTCCTCCGGCGTCTTGCTCTACGGCAACGCCACCGTTGATTCGGGAATCTTATCTCTCACTCATGATCGAGCTTTCTCTATTGGTCGTGCTCTTTACTCTCAGAAGATTCCCACCAAAGTCCCAAATTCTTCATATGTCAACCCTTTCTCTACTTCCTTCATTTTCGCCATGGCACCTTATAAGAATGTTCTTCCTGGCCATGGCCTTGTGTTCATCTTCACGCCTGTTCGAGGAATCCAAGGTACAAGCTCTGCTCAAAACTTAGGTTTCTTGAACTTCACCAACAATGGCGATTCCGGCAACCATGTGTTCGGTGTTGAGTTCGATGTGTTCAGGAATCAAGAGTTCGATGACATAAACGACAATCACGTTGGGATCGATGTGAACTCTCTCAAATCTGTTGTGGCAAACGATGCCGGGTACTGGCCGGACGACGGCAAGTCGTTCGAAGAATTGACGCTGAACGACGGTGAGAATTACCAGGTTTGGATTGATTATGAAGATTCTTTGATTAACGTAACTATGGCCCGAGTAGGATCAAAACGACCGCGCAGGCCATTGTTGAATCTGTCGTTGAACTTATCTGAAGTTTTTGAAGATGAAATGTATGTGGGATTTACAAGTGCGACAGGACAATTAGTTCAAAGTCACAAAATTCTGGCTTGGAGCTTTAGTAATTCGAATTTTTCACTAAGCGAAGCATTAATCACTTCTGGGTTACCTTCTTTTGTTCTTCCAGAAGATTCAATCGTCAAATCCAGAGGATTTATTGCAGGACTGACCATTGGGATTTTCTTGATACTCTGTTTCATCGTTCTGGTGACTCTGTTTTTAATACAGAGAAAACGAAGGAAAGCGAGGGAAAGAGAAGCAATGGAGGATTGGGAATTAGAGTACTGGCCACACAGAATAACCTACGAAGAAATCGAATCAGCAACAAAAGGATTCTCCGAGGAAAACGTGATCGGAATCGGAGGAAACGGCAAGGTATACAAAGGAATCCTGGGAGGATCAGAAATCGCAGTGAAACGAATATCCCCCGAAAACAATGGAATGAGAGAATTCCTAGCAGAAGTCTCCAGTCTGGGAAGACTCAAACACAGAAACCTCGTAAGATTACGAGGATGGTGCAAGAAAGACCCAGGAAATTTCTTACTAATCTACGACTACATGGAAAATGGGAGTCTAGAAAAATGGGTATTTCAAAACGAAGACGACGACAAGAGCCTAAACTATGAGCAGAGGATAAGGATTATGAAGGATGTGGCTAGTGGGGTCATGTACTTGCATGAAGGTTGGGAAGTGAAAGTAGTACACAGAGATATTAAAGCCAGCAACGTACTGTTAGATAAGGGGCTTAACGGAAGGTTGGGAGATTTTGGGTTGGCTTTGATGCACAAAAATGATGAAGTGGCTAGGACCACCAAAGTGGTTGGGACGGTGGGTTACATGGCCCCTGAAACGATGAAGACTGGAAAAGCGTCAACTCAGAGTGATGTTTACATGTTTGGAATCTTGGTTTTGGAAGTCATGTGTGGAAGGAGACCTATTGAGGAAGGAAAACCATCCTTGGTGGAGTGGGTGTGGCAACTCAAAGCACAAGGACAACTAATAAGAGCAATGGATGAGAGAATGAGGGCAAAAGGAGAAGTGAATGAACAACAAGTAGAAACAATTCTTAACTTGGGATTATTGTGTGCTTATCCTGACCCAAAAGCCAGGCCAACAGTGAGACAAGCACTGAAGGTTTTGGAGGGAAAGAATATTACTACTACTAATAATAATAATAGTGAAGATGGTGGAGAGCATGATGAAAGTGAAGATATGGGTACCTATTTGCTTAAAACCATTACATCCCCAAAGGACTTATGGTCTGAGTATTCTCTTTACTTAAACTTCTCATCTCACCCAACATTTGAAGATGTTAGACACACTACTACTTCTTCTTCTTCATCTAACACTATTCTTGAGGGCAGGTAA 2094 0.4284 MIKLKHRPPCFFPLLLLILIFSFSDSSLAVDFIFNGFNSSGVLLYGNATVDSGILSLTHDRAFSIGRALYSQKIPTKVPNSSYVNPFSTSFIFAMAPYKNVLPGHGLVFIFTPVRGIQGTSSAQNLGFLNFTNNGDSGNHVFGVEFDVFRNQEFDDINDNHVGIDVNSLKSVVANDAGYWPDDGKSFEELTLNDGENYQVWIDYEDSLINVTMARVGSKRPRRPLLNLSLNLSEVFEDEMYVGFTSATGQLVQSHKILAWSFSNSNFSLSEALITSGLPSFVLPEDSIVKSRGFIAGLTIGIFLILCFIVLVTLFLIQRKRRKAREREAMEDWELEYWPHRITYEEIESATKGFSEENVIGIGGNGKVYKGILGGSEIAVKRISPENNGMREFLAEVSSLGRLKHRNLVRLRGWCKKDPGNFLLIYDYMENGSLEKWVFQNEDDDKSLNYEQRIRIMKDVASGVMYLHEGWEVKVVHRDIKASNVLLDKGLNGRLGDFGLALMHKNDEVARTTKVVGTVGYMAPETMKTGKASTQSDVYMFGILVLEVMCGRRPIEEGKPSLVEWVWQLKAQGQLIRAMDERMRAKGEVNEQQVETILNLGLLCAYPDPKARPTVRQALKVLEGKNITTTNNNNSEDGGEHDESEDMGTYLLKTITSPKDLWSEYSLYLNFSSHPTFEDVRHTTTSSSSSNTILEGR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5861g00005 697 Pfam Protein kinase domain 355 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5861g00005 697 SMART serkin_6 354 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5861g00005 697 Gene3D Phosphorylase Kinase; domain 1 315 428 - -
Pral5861g00005 697 ProSiteProfiles Protein kinase domain profile. 354 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5861g00005 697 Gene3D Transferase(Phosphotransferase) domain 1 429 647 - -
Pral5861g00005 697 CDD STKc_IRAK 360 624 - -
Pral5861g00005 697 FunFam L-type lectin-domain containing receptor kinase S.4 28 270 - -
Pral5861g00005 697 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 316 428 - -
Pral5861g00005 697 ProSitePatterns Protein kinases ATP-binding region signature. 360 381 IPR017441 GO:0005524
Pral5861g00005 697 PANTHER - 48 626 - -
Pral5861g00005 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Pral5861g00005 697 Gene3D - 29 272 - -
Pral5861g00005 697 SUPERFAMILY Protein kinase-like (PK-like) 331 625 IPR011009 -
Pral5861g00005 697 Pfam Legume lectin domain 30 266 IPR001220 GO:0030246
Pral5861g00005 697 CDD lectin_legume_LecRK_Arcelin_ConA 30 260 IPR001220 GO:0030246
Pral5861g00005 697 FunFam L-type lectin-domain containing receptor kinase S.4 429 635 - -
Pral5861g00005 697 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 267 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5861g00005 Pral-Chr5861 94024 96947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5861g00005 29 569 Receptor kinase-like Gene Family AT4G04960 66.667 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pral5861g00005 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5861g00005 - - gmx:100804391 974.156