Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral585g00005 ATGGTGTCACGCGGTGCTACTGCCATAAGTTATTTTGAAAATTCTGCTTTTGTTGTTTTGAGCAGGAACTATGGGATTGGCAATCGAGTTCGATCGATTGTTAGTCTCTCTGGCATCAGCACATTCCCCAGTCGTAATAGGATTAGTAGAGATTGCTTTAGGGTCAATCCGATTGCTCCCAGAAGATCTACAAGTTTACTTCTTAGTATAAAGGGGTTTCTCTCTGATTCATCAAATTCTAATTCCTATTCTTCACTATATGGCAGAGTAACCAGACCATGCTTTCCACAACCTGGTTCAACGGTAGACGGACGAGCATTATTCTCAACTTCAACTAAAACTGATGATGGAACGTCCTCAAAGAAGACCGAGACCCAGAACCAAAAAACTACAACCACGATTGCTAAAACTTCTTCAGGGGAACGAGTTGCTGACATTAAAATTCTCCGTACACTTGCGAGTTACTTGTGGATGAAGGATAATCTTGAATTCCGATTCCGGGTTATTGCTGCTTTGGGTTTTCTTGTTGGTGCTAAGGTTCTGAATGTTCAGGTCCCTTTCTTATTCAAGCTTGCAGTTGATTGGTTGACGACTGCTACAGGCAATGCTGGTGATCTTGCTTCTTTTACAGCTGCAAATTCAACTCTGTTAGCTATTTTCGCAACTCCAGCATCTGTTTTAATCGGATATGGAATTGCTCGTTCAGGAGCTTCTGCTTTCAATGAACTTCGTACTGCTGTATTCTCTAAGGTAGCATTGCGAACAATTCGATTAGTATCTAGAAAGGTGTTCTCTCATTTGCATGAGCTTGACCTACGCTATCACCTAAGCCGAGAAACTGGAGCATTAAATAGAATAATTGATCGTGGGAGTCGTGCAATAAATTTTATACTCTCATCTATGGTGTTCAATGTAGTACCCACTGTATTAGAGATATCTATGGTATCAGGTATACTGGCTTACAAATTTGGAGCACCTTTTGCATGGATCACATCCTTATCGGTGGCTGCTTATGTTATTTTTACACTGACTGTGACACAGTGGAGGACTAAATTCAGGAAGGTCATGAATAAAGCTGATAATGATGCAAGTACCAGGGCAGTTGATTCACTTATTAATTATGAGACTGTCAAGTATTTCAATAATGAAGATTTTGAAGTTGAAAAATATGACGAGTACCTAAAGAGGTATGAAGATGCTGCTCTGAAAACACAACGCAGTCTTGCTTCTCTGAACTTCGGCCAAAATGTTATATTTAGTACTGCACTTTCTACGGCAATGGTGTTGTCTTCTCATGGGATTATGAGTGGCCAGATGACTGTTGGTGATTTGGTGATGGTGAATGGGCTCCTCTTCCAACTTTCTCTTCCGCTTAACTTCCTTGGCAGTGTTTATCGTGAGACTATACAGAGTTTAGTTGACATGAAATCAATGTTTCAGTTACTCGAGGAAAGAGCTGATGTTAGGGATAAAGACAATGCAAAGCCGCTGGAATTATATGGAGGGAGCATAGAGTTTGAAAATGTACATTTCAGTTACCTTGCAGAGAGAATACTCGATGGAATATCTCTTATTGTACCAGCCGGAAAAAGTGTGGCAATTGTTGGAACTAGTGGAAGTGGTAAATCAACCATTCTTAGATTGCTCTTCAGGTTTTTTGACCCTAATTCTGGAAGTATAAATATAGATGGTCAAAACATCCAGGATGTAACCCTTGATAGTCTTCGGAGGTCTATTGGGGTTGTTCCGCAAGATACTGTACTTTTCAATGATACAATATTCCACAACATCCATTATGGTCGACTTTCAGCCACTAAAGAGGAAGTCTATAAAGCTGCTCAACAAGCAGCGATTCATGACACTATCATGAATTTTCCTGAAAAATATTCAACTGTTGTGGGAGAGCGAGGGCTCAAGTTAAGTGGTGGTGAAAAGCAACGTGTTGCCTTGGCTCGTGCGTTTTTGAAAGCACCTCCAATTCTGTTATGTGATGAAGCTACGAGTGCACTTGACAGCACAACTGAAGCAGAGATATTAAATGCTTTGAAATCTTTAGCAAATAATCGCACTTCCATATTCATTGCTCACAGGCTTACTACTGCAATGCAGTGTGATGAGATCATAGTGTTGGAAAATGGAAAGGTGGTTGAACAAGGACCACATGAGCTGCTCTTATCTGAGGCAGGAAGATATGCACAACTGTGGGCCCAGCAAAATAACACAGTTGATGCAGCGATGAAAGTTGCGGCATAA 2253 0.4075 MVSRGATAISYFENSAFVVLSRNYGIGNRVRSIVSLSGISTFPSRNRISRDCFRVNPIAPRRSTSLLLSIKGFLSDSSNSNSYSSLYGRVTRPCFPQPGSTVDGRALFSTSTKTDDGTSSKKTETQNQKTTTTIAKTSSGERVADIKILRTLASYLWMKDNLEFRFRVIAALGFLVGAKVLNVQVPFLFKLAVDWLTTATGNAGDLASFTAANSTLLAIFATPASVLIGYGIARSGASAFNELRTAVFSKVALRTIRLVSRKVFSHLHELDLRYHLSRETGALNRIIDRGSRAINFILSSMVFNVVPTVLEISMVSGILAYKFGAPFAWITSLSVAAYVIFTLTVTQWRTKFRKVMNKADNDASTRAVDSLINYETVKYFNNEDFEVEKYDEYLKRYEDAALKTQRSLASLNFGQNVIFSTALSTAMVLSSHGIMSGQMTVGDLVMVNGLLFQLSLPLNFLGSVYRETIQSLVDMKSMFQLLEERADVRDKDNAKPLELYGGSIEFENVHFSYLAERKXLDGISLIVPAGKSVAIVGTSGSGKSTILRLLFRFFDPNSGSINIDGQNIQDVTLDSLRRSIGVVPQDTVLFNDTIFHNIHYGRLSATKEEVYKAAQQAAIHDTIMNFPEKYSTVVGERGLKLSGGEKQRVALARAFLKAPPILLCDEATSALDSTTEAEILNALKSLANNRTSIFIAHRLTTAMQCDEIIVLENGKVVEQGPHELLLSEAGRYAQLWAQQNNTVDAAMKVAA 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral585g00005 751 Pfam ABC transporter 520 669 IPR003439 GO:0005524
Pral585g00005 751 Pfam ABC transporter transmembrane region 169 457 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral585g00005 751 SUPERFAMILY ABC transporter transmembrane region 163 483 IPR036640 GO:0005524|GO:0016020
Pral585g00005 751 CDD ABCC_ATM1_transporter 504 739 - -
Pral585g00005 751 ProSitePatterns ABC transporters family signature. 641 655 IPR017871 GO:0005524|GO:0016887
Pral585g00005 751 Gene3D ABC transporter type 1, transmembrane domain 155 494 IPR036640 GO:0005524|GO:0016020
Pral585g00005 751 Gene3D - 497 749 IPR027417 -
Pral585g00005 751 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 169 470 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral585g00005 751 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 492 739 IPR027417 -
Pral585g00005 751 FunFam ATP-binding cassette sub-family B member 7 140 492 - -
Pral585g00005 751 FunFam ABC transporter B family member 25 496 750 - -
Pral585g00005 751 SMART AAA_5 529 715 IPR003593 GO:0016887
Pral585g00005 751 CDD ABC_6TM_ATM1_ABCB7 171 478 - -
Pral585g00005 751 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 504 738 IPR003439 GO:0005524
Pral585g00005 751 MobiDBLite consensus disorder prediction 98 128 - -
Pral585g00005 751 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 131 735 IPR039421 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral585g00005 Pral-Chr585 45049 56380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral585g00005 340 747 Calmodulin-binding Proteins AT2G36910 35.800 4.96e-64 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral585g00005 K05662 - gmx:100787870 1082.4