Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5857g00003 ATGGTGCAGAGAAAGGTGACGAGCAAGGCCTTAATCCACGCCGATAATGGTGAATTTGATAAGCACTTGGAACACTTGCAGCAGTCTTCTCACCACCAGGATGGCGTAACCAGTGGAGATGAGACGAATAAGTCAAGATCAATTCAGCTTTCTGATTTAGAGGCTTTCCAATCATCACCTTCAAGACGAAGCTTTTCCAAACCCGGAAAGCCATCACCTTCTCATGTTCCAATCACTGCCAAATCTCAAAAAACGCAGCAGCCACTGATGAGAACAGACACGTCAATTCATTACATGAAGCCCACCATCAGTTCAGGTGCAAAGGAGCTCTTTCCAGCGAGCCTTTCCAACTCTCAAGCTGATTATGATTATAAGGATCAAAAGGAAAAGCTTTCTAGTAATTGGAAGGCCAGCGTTGTTCCTGGTAAGCAACCTGCAAAAACTTTGACAAGACCATCAAGTTTGAGGAACTCTCTGTCTCCTAAACGCCCCATGACTGATCCTCGTGTTACAGAGTCACAGAGAACTTCAGTTATGAAGGATTGTCCGTATACATTTTGCTCTCTTAATGGTCATTGCCATACTCCTTTGCCTCGAATGAAGAGCTTCTTGTCAGAAAGGAGAAGTCTTTTTAAGGCCGAGAAGACCATGAAGCAGGAAGAACTAAGCCTTCAAAGATTGAAGGTGCCCTTCATCACCAAAGTCTTTGACACTGAGCAGATTGTTATTGATGGCAATTCTGCAGGTGATGACGCAGAAGTAGATTTCTTTATTGAAATCTATGCTAACGTAAAGGAACATGAATCAAAACCAGCAGCAACAGGTCATGGACATGAAACAGGAAAACTAGAATCCTCTGAAGAGCTTCAGGATCAAGAAGTTATCAAGTTTATAATTGAGGAGAATAGCTTGGCTGCAAGAGGGGATAATGTCAAGCATATTACCACAAATATGTCTGACGAGTCCCCTGAGCTTGAATCAAATTCCAAGAAATATTTCAAGAAATACTATGATGATCCTGCAACTAAGGCAGATACCATGCTAAGCATTCATCAGGAACATAACGAAGAATCTGCAAGTGAAAGCCACCCACCTAGCTGTTCTCATAAAGGTACGAGTATGGAAATCTGCTACAAAGGGATTAGATTTAATGATTGGGAACAGTTGGGAAGCAGTGAAATAGATGATTGTGATTTTGAAGCTACTGATACAGAGTGGAAGGAGGAACAATTTTGCACGTCAAAACTTGAAGAGAGAGTTGTTTTAGCTGAAGAGGAAACAGAGTTCAGGCTTGAGTCTTCATCAGAGAGTTTACTAGAGGCATCTGTAAAATCAGATAAAATTGTTAGCACTAGAAGGCTCGAAAAGATAGAATACTTAGTTGAAGAAGCATCCCAAGAAGCCAAAGCAAAAGAATGTGCTTGTTTTGAAGCACAACCTCTTGACACTGTTTTGGACCAGGAGCCACAATTGAAAGCACAGAGACTCTTACATAAGATTGATGATACCGATGAAGGCAAAGACTCAAGTCCAGAGACTGATGATGGAAGCACTAGCCAAGCGACACATATTCTAATGAAAGATGTGCAAAGTGAAAATATCTTTACTGCTCAAGACAAGGAAATGTTGGAAGCAATTGAGAGTGGAGCTAATAAGTTGCAGGGCACAAGCTGCACGGGCACTGAAGAGGAGAAAAGAAGCAAGAATTGGAGAGGAGAAATGAAGCACAAGATACCTGTCAAGGATGATGAGCAACTGAGGAAGTTCGACCAACGAATGCCAAACTTCTTGCCCTTGATCCCAAATCCAGAACGAGAAAAGGTTATTCTCAAACATCAGATAATGGATGAAAGAAAAATTGCAGAGCAATGGATGCTTGACCATGCACTTAGGCAAGCAGTCACCAAACTTGCTCCGGTGAGGAAAAGTAAGGTGGCACTGCTGGTTGAAGCGTTTGAAGCAGTAATGCCAATTACCCAAAAGGAAAAACCATTGAAAAAAGGTTCAGCCTTTGCTCATGGAAGAACTATCCATGCTTGA 2040 0.4196 MVQRKVTSKALIHADNGEFDKHLEHLQQSSHHQDGVTSGDETNKSRSIQLSDLEAFQSSPSRRSFSKPGKPSPSHVPITAKSQKTQQPLMRTDTSIHYMKPTISSGAKELFPASLSNSQADYDYKDQKEKLSSNWKASVVPGKQPAKTLTRPSSLRNSLSPKRPMTDPRVTESQRTSVMKDCPYTFCSLNGHCHTPLPRMKSFLSERRSLFKAEKTMKQEELSLQRLKVPFITKVFDTEQIVIDGNSAGDDAEVDFFIEIYANVKEHESKPAATGHGHETGKLESSEELQDQEVIKFIIEENSLAARGDNVKHITTNMSDESPELESNSKKYFKKYYDDPATKADTMLSIHQEHNEESASESHPPSCSHKGTSMEICYKGIRFNDWEQLGSSEIDDCDFEATDTEWKEEQFCTSKLEERVVLAEEETEFRLESSSESLLEASVKSDKIVSTRRLEKIEYLVEEASQEAKAKECACFEAQPLDTVLDQEPQLKAQRLLHKIDDTDEGKDSSPETDDGSTSQATHILMKDVQSENIFTAQDKEMLEAIESGANKLQGTSCTGTEEEKRSKNWRGEMKHKIPVKDDEQLRKFDQRMPNFLPLIPNPEREKVILKHQIMDERKIAEQWMLDHALRQAVTKLAPVRKSKVALLVEAFEAVMPITQKEKPLKKGSAFAHGRTIHA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5857g00003 679 MobiDBLite consensus disorder prediction 133 176 - -
Pral5857g00003 679 MobiDBLite consensus disorder prediction 52 92 - -
Pral5857g00003 679 SMART CaM_binding_2 544 657 IPR012417 GO:0005516
Pral5857g00003 679 MobiDBLite consensus disorder prediction 268 287 - -
Pral5857g00003 679 Coils Coil 454 474 - -
Pral5857g00003 679 MobiDBLite consensus disorder prediction 147 161 - -
Pral5857g00003 679 MobiDBLite consensus disorder prediction 76 92 - -
Pral5857g00003 679 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 156 IPR044681 GO:0005516
Pral5857g00003 679 MobiDBLite consensus disorder prediction 52 68 - -
Pral5857g00003 679 Pfam Plant calmodulin-binding domain 575 657 IPR012417 GO:0005516
Pral5857g00003 679 MobiDBLite consensus disorder prediction 499 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5857g00003 Pral-Chr5857 46522 49452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5857g00003 574 679 Calmodulin-binding Proteins AT2G38800 49.057 5.05e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5857g00003 - - gmx:102670203 392.504