Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5856g00001 | ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCCGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTCGACTGCTGCTTCATGACGGATGCTTGGAATGAAGAAAACTATAAAGTCTACATGGACGGAATTGTTGCTCAACTTCGAGAGCACTTTCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAAAGAGTCAGATGGCTAACATCTTGTCAGATTATGATATGACTATAATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAGGTCATCCACCACTTTTTACGGTCGAGTGAAAGTTGGCTCTCGCTTGGGCAGCATAATGTTCTGTTGATGCACTGTGAACGTGGTGGCTGGCCGGTTTTGGCTTTCATGCTGGCTGCGCTTTTGATTTATCGAAAGCAATACAGCGGAGAACAGAGAACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCAGTTTTTGTCACCGTTAAATCCGATTCCTTCCCAGCTGCGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCATAGATTGGCCGCCATTGGACAGGGCGCTTACGTTGGACTGCATCATTCTCAGATGTTTCCCGAACTTTGATGGGGAAGGTGGATGCTGTCCTGTATTTCGAATTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCAAAAATCTTGTATTCAACACAGAAGAAAAATAAAACCATCCGGTTTTACAAGCAGGGAGAGTGTGAACTAATTAAAATTGACATCAACTGTCATATCCAAGGTGATGTTGTGATTGAATGCATCAACTTGACCAGTGATATGGACCACGAACGGATGATGTTCCGAGTCATGTTCAACACAGCTTTTATTAGGTCCAACATATTGATGCTTAACCGGGATGAAGTTGATATTTTATGGGATGCTAAGGATGACTTCCCCAAGGATTTCAGAGCGGAGATCCTTTTCTCAGAGATGGATGCTGCTGCTGCTGTTATTGCGGATGGTACCTCATGCTTTGAGGAGAAGGAGGGACTGCCAGTGGAAGCATTTGCCAAGGTTCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCTGATGTTGCGCTAAATGTACTCCAACAAATTAGTGCTTCGGTGCATGACCAGATAGATAGAATTTCTACTCAGCAGCATGATACTGGATCTTTGTTGCATGAAAAAGATTCTAGAGTGCCTCAGGGAAAAAAGAATGAAGCAAAAAGGTTATTGTCATCAGATAATGAATCCTCAGAGTTTGGTAAACCTGTGACAAGTTCTACAAAGTTTGATGTAGAAGCACAAGTGGATGATCTTGCCATGTCTAGCTCTGTAGACATTTCTAGTGAATCACTTTCACCAAACACACCTCCACAGAATCCTTCCTTGCTTAGAAAATCTAATACTCCACCCAACACACAACTACCTTCTTATCTTTCCCCTCTAGGACCAGCTTATCCTGTTACTGGCGAATTTGAAGTCCAATCAAAAGACAGAAGTGAGTCATCAATCTTTAGTTCAACATCTGGAACATCATTATCAAGTGCCTTTCCAAATAAGTTGCCTCTTGACGCTGCTTCCCATTTTTCAGCTTCATCTATGACTTCAACTCAGCCATCTCCTTCCCCTACAACCCCTATGAAGGAGATTCTACCTGTTAGAACTAGACCTGCTTCATCCACTTCACAACCTCCAACACCACCCACACCCACGACTCCTCCTCAAAAGGAGCATAAACTGGTTAGAGCTGTACCTCCCCCGCCGCCGCCACCTCCACCTCCACAGAAAAAGCAATCACCGGTTAGAGTCATGCCTCCTCCACCCCCACCAATGGAAGAACCACATTTTCGACCCCCTCCTCCCCAACGGCCTCCTCTAAAGGAGGAGCCTAACGTTAAAACTGGACCACCACCCCCTCCACCACCTCCTTTGAAGTTGCAGCCACCTGTTAGGGCTAAAACTCCTCCTCCTCCTCCTCCACGTCTTCCTAGGAAAGCTGATTCTACCACCGTACCACCACCACCACCACCTCCTCCTCCCCCTGCTGCAGAACTCTCCTCCAAGAACCCTAATCCTTTGTTGCAGAATTCTACATCTGTTCCTGCTGCTCCTAATGCTCCTCCACCTCCTGTTCCCATTAGTAAAGGAGATCTAAAATCAGGGGATGGAAATATTGCATCTAGTACGACAGGACCCCGAGGACGAATTCTATCTCGTACAATAAGTAGTACCAAAAATCAAAATAAAAAGCTGAAGCCGTTGCATTGGCTGAAAATATCTAGAGCAGTGCAAGGAAGTTTGTGGCATGAGGCAGCGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATTTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCGCTGCCAAGAAAGTAGGTGGCAGAAGCTCAGCTGGGCCTAAATCTGATAAAGTGCAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCAAGATTTGATGAGCTCAGTGCTAGCACTAGAGGACTCAGCACTAGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGTTATACTGGAGAAAAGGAGAAGTTAGGGAGGTGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCCAGGGTAGAGTCCAAACTCAGAGTGTTTTCATTCAAGATTCATTTCCAATCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTAGATGCTACTGTAGAAGAGATTAGGAATTCTTTCAAATTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGTTCTGCTATTGGATTCAGATTGGACAGCCTTCTTAAACTCACTGAGACACGAGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCTGAAGTTCTAGACTTCTCCAAGGATCTTTCTAACCTAGAGCCTGCAGCAAAGATCCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTGTAAGCAAAGGATTAGAGAAAGTTATCCAGGAACTCTCAACCTCTGAAAATGATGGTCCTATATCTGAGACATTCCGCAAGACTTTGAAAGACTTCCTCCGTTCTGCTGAAGCTGAAGTTCGATCACTGGCTTCATTATATTCTGGCGTGGGTAGGAAAGTGGACGCGTTGATTGTTTATTTTGGTGAAGATCCATCTCGCTGCCCTTTTGAGCAAGTTGTGTCAACCTTGCTCAACTTCACGAGGATGTTTTACAAAGCCCATGAAGAAAACTGCAAGCAGCTTGAGCTTGAAATGAAGAAATCATCTGATGGTGAGAAAAAGATATGTGAATCACAAAGGATACTGCCTACAGCAATCCGGACCGGCAACGTCAAGTGA | 3525 | 0.4443 | MTLLRKLFFRKPPDGLLEICERVYVFDCCFMTDAWNEENYKVYMDGIVAQLREHFPDASILVFNFRQEETXSQMANILSDYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLQFLSPLNPIPSQLRYLQYISRRNVAIDWPPLDRALTLDCIILRCFPNFDGEGGCCPVFRIYGQDPFLADKTPKILYSTQKKNKTIRFYKQGECELIKIDINCHIQGDVVIECINLTSDMDHERMMFRVMFNTAFIRSNILMLNRDEVDILWDAKDDFPKDFRAEILFSEMDAAAAVIADGTSCFEEKEGLPVEAFAKVQEIFNHVDWLNPKADVALNVLQQISASVHDQIDRISTQQHDTGSLLHEKDSRVPQGKKNEAKRLLSSDNESSEFGKPVTSSTKFDVEAQVDDLAMSSSVDISSESLSPNTPPQNPSLLRKSNTPPNTQLPSYLSPLGPAYPVTGEFEVQSKDRSESSIFSSTSGTSLSSAFPNKLPLDAASHFSASSMTSTQPSPSPTTPMKEILPVRTRPASSTSQPPTPPTPTTPPQKEHKLVRAVPPPPPPPPPPQKKQSPVRVMPPPPPPMEEPHFRPPPPQRPPLKEEPNVKTGPPPPPPPPLKLQPPVRAKTPPPPPPRLPRKADSTTVPPPPPPPPPPAAELSSKNPNPLLQNSTSVPAAPNAPPPPVPISKGDLKSGDGNIASSTTGPRGRILSRTISSTKNQNKKLKPLHWLKISRAVQGSLWHEAAKSGEASKAPEIDISELESLFSAAVPSSGAAKKVGGRSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLQDLMSSVLALEDSALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIHFQSQVSDLRKSLNIVDATVEEIRNSFKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDLSNLEPAAKIQLKFLAEEMQAVSKGLEKVIQELSTSENDGPISETFRKTLKDFLRSAEAEVRSLASLYSGVGRKVDALIVYFGEDPSRCPFEQVVSTLLNFTRMFYKAHEENCKQLELEMKKSSDGEKKICESQRILPTAIRTGNVK | 1175 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5856g00001 | 1175 | PANTHER | FORMIN-J | 1 | 1156 | - | - | |
Pral5856g00001 | 1175 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 691 | 1150 | - | - | |
Pral5856g00001 | 1175 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 201 | 337 | IPR035892 | - | |
Pral5856g00001 | 1175 | MobiDBLite | consensus disorder prediction | 408 | 434 | - | - | |
Pral5856g00001 | 1175 | MobiDBLite | consensus disorder prediction | 580 | 705 | - | - | |
Pral5856g00001 | 1175 | Pfam | C2 domain of PTEN tumour-suppressor protein | 200 | 336 | IPR014020 | - | |
Pral5856g00001 | 1175 | SMART | PTEN_C2_2 | 197 | 336 | IPR014020 | - | |
Pral5856g00001 | 1175 | SMART | it6_source | 760 | 1170 | IPR015425 | - | |
Pral5856g00001 | 1175 | Coils | Coil | 1134 | 1154 | - | - | |
Pral5856g00001 | 1175 | Gene3D | Protein tyrosine phosphatase superfamily | 14 | 191 | IPR029021 | - | |
Pral5856g00001 | 1175 | MobiDBLite | consensus disorder prediction | 518 | 537 | - | - | |
Pral5856g00001 | 1175 | MobiDBLite | consensus disorder prediction | 460 | 766 | - | - | |
Pral5856g00001 | 1175 | MobiDBLite | consensus disorder prediction | 397 | 445 | - | - | |
Pral5856g00001 | 1175 | Pfam | Formin Homology 2 Domain | 762 | 1133 | IPR015425 | - | |
Pral5856g00001 | 1175 | ProSiteProfiles | C2 tensin-type domain profile. | 199 | 337 | IPR014020 | - | |
Pral5856g00001 | 1175 | MobiDBLite | consensus disorder prediction | 460 | 498 | - | - | |
Pral5856g00001 | 1175 | MobiDBLite | consensus disorder prediction | 545 | 563 | - | - | |
Pral5856g00001 | 1175 | Gene3D | Formin, FH2 domain | 757 | 1144 | IPR042201 | - | |
Pral5856g00001 | 1175 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 760 | 1159 | IPR015425 | - | |
Pral5856g00001 | 1175 | Gene3D | - | 196 | 340 | - | - | |
Pral5856g00001 | 1175 | MobiDBLite | consensus disorder prediction | 740 | 766 | - | - | |
Pral5856g00001 | 1175 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 12 | 187 | IPR029021 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5856g00001 | Pral-Chr5856 | 2612 | 12292 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5856g00001 | 1 | 398 | Protein tyrosine phosphatase (PTP) family | AT5G58160 | 68.579 | 0.0 | 615 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5856g00001 | - | - | aprc:113848377 | 1551.95 |