Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5856g00001 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCCGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTCGACTGCTGCTTCATGACGGATGCTTGGAATGAAGAAAACTATAAAGTCTACATGGACGGAATTGTTGCTCAACTTCGAGAGCACTTTCCTGATGCTTCGATCTTGGTCTTCAATTTCCGCCAGGAAGAAAAGAGTCAGATGGCTAACATCTTGTCAGATTATGATATGACTATAATGGACTACCCTCGGCAATATGAGGGCTGCCCAGTGCTCAAGATGGAGGTCATCCACCACTTTTTACGGTCGAGTGAAAGTTGGCTCTCGCTTGGGCAGCATAATGTTCTGTTGATGCACTGTGAACGTGGTGGCTGGCCGGTTTTGGCTTTCATGCTGGCTGCGCTTTTGATTTATCGAAAGCAATACAGCGGAGAACAGAGAACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCAGTTTTTGTCACCGTTAAATCCGATTCCTTCCCAGCTGCGGTATCTGCAGTATATTTCCAGGAGGAATGTGGCCATAGATTGGCCGCCATTGGACAGGGCGCTTACGTTGGACTGCATCATTCTCAGATGTTTCCCGAACTTTGATGGGGAAGGTGGATGCTGTCCTGTATTTCGAATTTATGGACAAGATCCTTTTCTTGCAGATAAAACTCCAAAAATCTTGTATTCAACACAGAAGAAAAATAAAACCATCCGGTTTTACAAGCAGGGAGAGTGTGAACTAATTAAAATTGACATCAACTGTCATATCCAAGGTGATGTTGTGATTGAATGCATCAACTTGACCAGTGATATGGACCACGAACGGATGATGTTCCGAGTCATGTTCAACACAGCTTTTATTAGGTCCAACATATTGATGCTTAACCGGGATGAAGTTGATATTTTATGGGATGCTAAGGATGACTTCCCCAAGGATTTCAGAGCGGAGATCCTTTTCTCAGAGATGGATGCTGCTGCTGCTGTTATTGCGGATGGTACCTCATGCTTTGAGGAGAAGGAGGGACTGCCAGTGGAAGCATTTGCCAAGGTTCAGGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCTGATGTTGCGCTAAATGTACTCCAACAAATTAGTGCTTCGGTGCATGACCAGATAGATAGAATTTCTACTCAGCAGCATGATACTGGATCTTTGTTGCATGAAAAAGATTCTAGAGTGCCTCAGGGAAAAAAGAATGAAGCAAAAAGGTTATTGTCATCAGATAATGAATCCTCAGAGTTTGGTAAACCTGTGACAAGTTCTACAAAGTTTGATGTAGAAGCACAAGTGGATGATCTTGCCATGTCTAGCTCTGTAGACATTTCTAGTGAATCACTTTCACCAAACACACCTCCACAGAATCCTTCCTTGCTTAGAAAATCTAATACTCCACCCAACACACAACTACCTTCTTATCTTTCCCCTCTAGGACCAGCTTATCCTGTTACTGGCGAATTTGAAGTCCAATCAAAAGACAGAAGTGAGTCATCAATCTTTAGTTCAACATCTGGAACATCATTATCAAGTGCCTTTCCAAATAAGTTGCCTCTTGACGCTGCTTCCCATTTTTCAGCTTCATCTATGACTTCAACTCAGCCATCTCCTTCCCCTACAACCCCTATGAAGGAGATTCTACCTGTTAGAACTAGACCTGCTTCATCCACTTCACAACCTCCAACACCACCCACACCCACGACTCCTCCTCAAAAGGAGCATAAACTGGTTAGAGCTGTACCTCCCCCGCCGCCGCCACCTCCACCTCCACAGAAAAAGCAATCACCGGTTAGAGTCATGCCTCCTCCACCCCCACCAATGGAAGAACCACATTTTCGACCCCCTCCTCCCCAACGGCCTCCTCTAAAGGAGGAGCCTAACGTTAAAACTGGACCACCACCCCCTCCACCACCTCCTTTGAAGTTGCAGCCACCTGTTAGGGCTAAAACTCCTCCTCCTCCTCCTCCACGTCTTCCTAGGAAAGCTGATTCTACCACCGTACCACCACCACCACCACCTCCTCCTCCCCCTGCTGCAGAACTCTCCTCCAAGAACCCTAATCCTTTGTTGCAGAATTCTACATCTGTTCCTGCTGCTCCTAATGCTCCTCCACCTCCTGTTCCCATTAGTAAAGGAGATCTAAAATCAGGGGATGGAAATATTGCATCTAGTACGACAGGACCCCGAGGACGAATTCTATCTCGTACAATAAGTAGTACCAAAAATCAAAATAAAAAGCTGAAGCCGTTGCATTGGCTGAAAATATCTAGAGCAGTGCAAGGAAGTTTGTGGCATGAGGCAGCGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATTTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAGTTCAGGCGCTGCCAAGAAAGTAGGTGGCAGAAGCTCAGCTGGGCCTAAATCTGATAAAGTGCAACTGGTTGAGCACAGAAGAGCATATAATTGTGAAATCATGCTTTCAAAAGTGAAAGTGCCATTGCAAGATTTGATGAGCTCAGTGCTAGCACTAGAGGACTCAGCACTAGACATTGATCAGGTTGAAAACCTTATAAAGTTTTGTCCTACAAAAGAGGAGATGGAATTACTCAAGGGTTATACTGGAGAAAAGGAGAAGTTAGGGAGGTGTGAACAGTTCTTCCTAGAGTTGATGAAAGTACCCAGGGTAGAGTCCAAACTCAGAGTGTTTTCATTCAAGATTCATTTCCAATCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATATTGTAGATGCTACTGTAGAAGAGATTAGGAATTCTTTCAAATTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGAACTGCTAGAGGTTCTGCTATTGGATTCAGATTGGACAGCCTTCTTAAACTCACTGAGACACGAGCACGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCTGAAGTTCTAGACTTCTCCAAGGATCTTTCTAACCTAGAGCCTGCAGCAAAGATCCAATTGAAGTTTTTGGCAGAGGAGATGCAAGCTGTAAGCAAAGGATTAGAGAAAGTTATCCAGGAACTCTCAACCTCTGAAAATGATGGTCCTATATCTGAGACATTCCGCAAGACTTTGAAAGACTTCCTCCGTTCTGCTGAAGCTGAAGTTCGATCACTGGCTTCATTATATTCTGGCGTGGGTAGGAAAGTGGACGCGTTGATTGTTTATTTTGGTGAAGATCCATCTCGCTGCCCTTTTGAGCAAGTTGTGTCAACCTTGCTCAACTTCACGAGGATGTTTTACAAAGCCCATGAAGAAAACTGCAAGCAGCTTGAGCTTGAAATGAAGAAATCATCTGATGGTGAGAAAAAGATATGTGAATCACAAAGGATACTGCCTACAGCAATCCGGACCGGCAACGTCAAGTGA 3525 0.4443 MTLLRKLFFRKPPDGLLEICERVYVFDCCFMTDAWNEENYKVYMDGIVAQLREHFPDASILVFNFRQEETXSQMANILSDYDMTIMDYPRQYEGCPVLKMEVIHHFLRSSESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLQFLSPLNPIPSQLRYLQYISRRNVAIDWPPLDRALTLDCIILRCFPNFDGEGGCCPVFRIYGQDPFLADKTPKILYSTQKKNKTIRFYKQGECELIKIDINCHIQGDVVIECINLTSDMDHERMMFRVMFNTAFIRSNILMLNRDEVDILWDAKDDFPKDFRAEILFSEMDAAAAVIADGTSCFEEKEGLPVEAFAKVQEIFNHVDWLNPKADVALNVLQQISASVHDQIDRISTQQHDTGSLLHEKDSRVPQGKKNEAKRLLSSDNESSEFGKPVTSSTKFDVEAQVDDLAMSSSVDISSESLSPNTPPQNPSLLRKSNTPPNTQLPSYLSPLGPAYPVTGEFEVQSKDRSESSIFSSTSGTSLSSAFPNKLPLDAASHFSASSMTSTQPSPSPTTPMKEILPVRTRPASSTSQPPTPPTPTTPPQKEHKLVRAVPPPPPPPPPPQKKQSPVRVMPPPPPPMEEPHFRPPPPQRPPLKEEPNVKTGPPPPPPPPLKLQPPVRAKTPPPPPPRLPRKADSTTVPPPPPPPPPPAAELSSKNPNPLLQNSTSVPAAPNAPPPPVPISKGDLKSGDGNIASSTTGPRGRILSRTISSTKNQNKKLKPLHWLKISRAVQGSLWHEAAKSGEASKAPEIDISELESLFSAAVPSSGAAKKVGGRSSAGPKSDKVQLVEHRRAYNCEIMLSKVKVPLQDLMSSVLALEDSALDIDQVENLIKFCPTKEEMELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIHFQSQVSDLRKSLNIVDATVEEIRNSFKLKRIMQTILSLGNALNQGTARGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDLSNLEPAAKIQLKFLAEEMQAVSKGLEKVIQELSTSENDGPISETFRKTLKDFLRSAEAEVRSLASLYSGVGRKVDALIVYFGEDPSRCPFEQVVSTLLNFTRMFYKAHEENCKQLELEMKKSSDGEKKICESQRILPTAIRTGNVK 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5856g00001 1175 PANTHER FORMIN-J 1 1156 - -
Pral5856g00001 1175 SUPERFAMILY Formin homology 2 domain (FH2 domain) 691 1150 - -
Pral5856g00001 1175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Pral5856g00001 1175 MobiDBLite consensus disorder prediction 408 434 - -
Pral5856g00001 1175 MobiDBLite consensus disorder prediction 580 705 - -
Pral5856g00001 1175 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Pral5856g00001 1175 SMART PTEN_C2_2 197 336 IPR014020 -
Pral5856g00001 1175 SMART it6_source 760 1170 IPR015425 -
Pral5856g00001 1175 Coils Coil 1134 1154 - -
Pral5856g00001 1175 Gene3D Protein tyrosine phosphatase superfamily 14 191 IPR029021 -
Pral5856g00001 1175 MobiDBLite consensus disorder prediction 518 537 - -
Pral5856g00001 1175 MobiDBLite consensus disorder prediction 460 766 - -
Pral5856g00001 1175 MobiDBLite consensus disorder prediction 397 445 - -
Pral5856g00001 1175 Pfam Formin Homology 2 Domain 762 1133 IPR015425 -
Pral5856g00001 1175 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Pral5856g00001 1175 MobiDBLite consensus disorder prediction 460 498 - -
Pral5856g00001 1175 MobiDBLite consensus disorder prediction 545 563 - -
Pral5856g00001 1175 Gene3D Formin, FH2 domain 757 1144 IPR042201 -
Pral5856g00001 1175 ProSiteProfiles Formin homology-2 (FH2) domain profile. 760 1159 IPR015425 -
Pral5856g00001 1175 Gene3D - 196 340 - -
Pral5856g00001 1175 MobiDBLite consensus disorder prediction 740 766 - -
Pral5856g00001 1175 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5856g00001 Pral-Chr5856 2612 12292 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5856g00001 1 398 Protein tyrosine phosphatase (PTP) family AT5G58160 68.579 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5856g00001 - - aprc:113848377 1551.95