Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5846g00059 ATGACCACACTCCCATGTCTAGTTTTCCTTCTGCTAGTGTTCTTGTTTCCTTCTTTCCTGACAAATACAGGCCATTTGGTTTCTGCAAAAGGGGGCAATTATGTCAGAGACGCATGCTCGGTGACTATGTACCCAGACCTGTGCATCCACTCTTTAGCATCATTTTCCAACACGGCCAGAGGGAGCCCGAGCAAGTGGGCCCGAGCAGGAGTGTCGGTGACAATAACCGAGGTTAAGAATGTTCAGGCACATCTTGCCAAGTTGAAGAGATACCGTCGTCTGAGAGGAAGAAGCAGAGCCGCTCTTTCGGATTGCATCGAGACCTTCGCAGATGCGCTTGATGAGCTTCACAGATCCCTTGGTGTGCTCAGAAGGCTAAGCAGAAGCACGTTTAGTGACCAGATGGATGATCTCAATACATGGATAAGTGCAGCTCTCACTGACGAAGATACTTGCCTTGATGGGTTCGAAGGCCAAAAGGAGGGGCAAATTAAATTGCTGCAGAATCAGGTTCTGAATGTCTCTTATATAACCAGTAACGCTCTCGCACTTGTCAACAAACTCGCCACCACAGGCCTGGGCAGCATCGCCGATCCATGA 600 0.4933 MTTLPCLVFLLLVFLFPSFLTNTGHLVSAKGGNYVRDACSVTMYPDLCIHSLASFSNTARGSPSKWARAGVSVTITEVKNVQAHLAKLKRYRRLRGRSRAALSDCIETFADALDELHRSLGVLRRLSRSTFSDQMDDLNTWISAALTDEDTCLDGFEGQKEGQIKLLQNQVLNVSYITSNALALVNKLATTGLGSIADP 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5846g00059 199 NCBIfam pectinesterase inhibitor domain 8 188 IPR006501 GO:0004857
Pral5846g00059 199 Pfam Plant invertase/pectin methylesterase inhibitor 34 184 IPR006501 GO:0004857
Pral5846g00059 199 FunFam Pectinesterase inhibitor 3 30 189 - -
Pral5846g00059 199 CDD PMEI-like_3 38 190 - -
Pral5846g00059 199 SMART PMEI_2 30 184 IPR006501 GO:0004857
Pral5846g00059 199 Gene3D Invertase/pectin methylesterase inhibitor family protein 32 190 IPR035513 -
Pral5846g00059 199 PANTHER PECTINESTERASE INHIBITOR-LIKE 8 184 - -
Pral5846g00059 199 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5846g00059 Pral-Chr5846 273181 275214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5846g00059 35 196 Carbohydrate Esterase AT3G14310 34.731 1.60e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5846g00059 - - qsu:112006490 246.514