Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5846g00054 ATGAGCCGCGGGGCAGCAACTGGAGCCAAGGGCAAGAGGAAGGGAATCAGCTTCGTAATCGATTGTTCGAAGCCGGTCGAAGATAAGATCATGGACGTCGCCTCGCTTGAGAAGTTCCTTCAGGAGAGGATTAAAGTCGGTGGCAAGGCCGGTGCCCTCGGTGATTCCGTCACCGTCACTCGTGACAAGAGCAAAATCACCGTTACTTCCGACAGCAATTTCTCTAAACGGTATTTGAAATATTTGACAAAGAAGTACCTGAAGAAGCATAATGTGAGGGATTGGCTACGCGTGATCGCATCCAACAAGGACCGCAATGTCTATGAGTTGAGATACTTCAACATCGCCGAGAACGAGGGAGAGGAGGAGGACTAG 375 0.504 MSRGAATGAKGKRKGISFVIDCSKPVEDKIMDVASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5846g00054 124 PANTHER 60S RIBOSOMAL PROTEIN L22 2 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
Pral5846g00054 124 FunFam 60S ribosomal protein L22-2 5 124 - -
Pral5846g00054 124 Gene3D - 5 124 IPR038526 -
Pral5846g00054 124 Pfam Ribosomal L22e protein family 16 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5846g00054 Pral-Chr5846 258896 260604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5846g00054 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.097 1.79e-68 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5846g00054 K02891 - pop:7455994 217.238