Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5846g00041 ATGGCCTTCGTGATTCTCCTCTTTCTACTCTTTCCTTCACTAGCTTTTGCAGAATCTCTCTCTCCTGCAGCTCTATGCCACCATTCCCCCCAACCTTCTTACTGCATGTCCCTCCTTCCTCCTCAAAACGCCACCGTCCATGACTCTTGTCGCTCCTCTATCCTCCAGTCCTTATTGCGAGCCCGCAGATTCTTGAACTCCCTCGACCAACTTCTCCAACGGCGCTCTTCTTTGTCTGCTGTGGCGGTCGCTGACCTTGAAGATTGCCGAACGCTTGCCGACCTCAACGTAGATTTTCTCTCAAATTCCTTGCAAATTATCAATAAGGCGGCTGGGTCTCTAGCAGATGTCGAAGTTGAAGGTGTTCAAACCATGCTCAGTGCTGTTTTAACCAACCATGAAACCTGCTTGGAAGGCCTCCAAGACACTTTCGTTTCCTCTCATCCCAACCTTGTAAGAAAGCTGGTTTCCCCACTTACCGTCGACAAGAAGTTTTACGGAGCCTCTTTATCCCTTTTTACAAAAGGTTGGGTCCCCGCCGTGAGTAAACAAAAACCTGAATTATCGCGACACCATCCTCCCCAAGTGCAAGTTGTATTCCGAGATGGTCATTTGTCTCTCGCGATGTCGAACAGAACACGTGCTATCTTCGAGGCTGCTAGTGGTAGAAAACTAGACCTGGCTTTTGCAGTTCCCAACATGTTGCATGTTAAAGACATCGCGATTGTAAGTAAAGACGGAACAGGTGACTTCACCACCATCAACGATGCCCTTTCTGCAGCTCCCGACGACTCTTCCTCTTCGGAAGGCTACTTCTTGATCTATGTCTCGGCCGGAGTTTACGAAGAATACATCTCCATCGATAAGAAAAAGACCTACTTGATGATGATGGGAGATGGTATCAACAGAACTATCATCACAGGCAATCATAGCTATGCATATAAGTGGCATCCCTATAGATCTGCAACATTCGCTGTGCACGGGAAGGGATTCATGGGAGTGAATATAACATTTCGTAACACGGCAGGGCCGGAGAATCACCAAGCGGTGGCAGTGCGGAACTCAGCAAATTTGTCCTTGTTTTATAGCTGCAGTTTTGAGGGATACCAAGACACACTGTACGCACATTCCATGAAACAGTTCTACAGAGAATGTGATATATACGGGACGGTGGATTTCATATGCGGGAATGCGGCTGCCGTGTTCCAAAACTGCAATATTTATGCTCGTAAGCCTATGAGGAAACAGTTCAACGCCATCACAGCACAAAGTCGAGAGAGCGATGATCAGAACACGGGCTTCTCAATACATAACTGCACAATTAGAGCAGCGGAGGATCTAGCAGGGACGGCGGCTACGTACCTAGGAAGGCCGTGGAAGCCACTGTCGAGGACGGTTTACATGGAGAGCTTTATGGACAACCTCATAGACGGGGCTGGCTGGCACTTCTGGGACAATGATAGTGAGAGTCGATTGGATAGCCTGTATTACGCAGAATATAATAATTCAGGTCCGGGATCTAACACCTCACATCGGGTCACTTGGAACGGTTATCATGTCATTAACTCTTCCATTGCTGCTGATTTCACCGTCTCCAGGTTCTTGTTAGGGGATTATTGGCTGCCCCTCACTGGCGTCCCCTACACCGGTGGGTTAATTAACTCCTGA 1668 0.482 MAFVILLFLLFPSLAFAESLSPAALCHHSPQPSYCMSLLPPQNATVHDSCRSSILQSLLRARRFLNSLDQLLQRRSSLSAVAVADLEDCRTLADLNVDFLSNSLQIINKAAGSLADVEVEGVQTMLSAVLTNHETCLEGLQDTFVSSHPNLVRKLVSPLTVDKKFYGASLSLFTKGWVPAVSKQKPELSRHHPPQVQVVFRDGHLSLAMSNRTRAIFEAASGRKLDLAFAVPNMLHVKDIAIVSKDGTGDFTTINDALSAAPDDSSSSEGYFLIYVSAGVYEEYISIDKKKTYLMMMGDGINRTIITGNHSYAYKWHPYRSATFAVHGKGFMGVNITFRNTAGPENHQAVAVRNSANLSLFYSCSFEGYQDTLYAHSMKQFYRECDIYGTVDFICGNAAAVFQNCNIYARKPMRKQFNAITAQSRESDDQNTGFSIHNCTIRAAEDLAGTAATYLGRPWKPLSRTVYMESFMDNLIDGAGWHFWDNDSESRLDSLYYAEYNNSGPGSNTSHRVTWNGYHVINSSIAADFTVSRFLLGDYWLPLTGVPYTGGLINS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5846g00041 555 CDD PMEI-like_3 24 177 - -
Pral5846g00041 555 Pfam Pectinesterase 241 538 IPR000070 GO:0030599|GO:0042545
Pral5846g00041 555 SMART PMEI_2 17 172 IPR006501 GO:0004857
Pral5846g00041 555 Gene3D - 235 552 IPR012334 -
Pral5846g00041 555 PANTHER PECTINESTERASE 11 542 - -
Pral5846g00041 555 FunFam Pectinesterase 234 552 - -
Pral5846g00041 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 174 IPR035513 -
Pral5846g00041 555 Pfam Plant invertase/pectin methylesterase inhibitor 23 160 IPR006501 GO:0004857
Pral5846g00041 555 SUPERFAMILY Pectin lyase-like 238 551 IPR011050 -
Pral5846g00041 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 24 174 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5846g00041 Pral-Chr5846 206101 207853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5846g00041 3 554 Carbohydrate Esterase AT1G02810 50.523 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5846g00041 K01051 - gmx:100790729 625.165