Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5846g00028 ATGTCCGCTGATACTCATGTCCCTGCTTCTAAGGTTATTCTTTGCAATGCTGGGGCCGGTGCCGCCGCCGGAGTTATTGCCGCTACATTTGTATGTCCTTTAGACGTCATCAAAACTAGGTTTCAGGTTCATGGGCTGCCGCAGCTTGCTAATGGAAGTATTAAAGGCAGTCTAATAGTTGGTAGTTTGGAACAAATATTTCACAAGGAGGGGTTCCGTGGCATGTACCGCGGTCTGGCGCCTACTGTGTTGGCTCTACTTCCAAACTGGGCGGTTTATTTTACCATGTATGAACAGTTTAAGAGCCTTCTTTGTTCCAACGATGAACACCATCATCTTTCAATTGGAGCTAATATGTTAGCTGCTTCTGCTGCTGGGGCTGCGACTACCATTGCTACAAATCCACTTTGGGTTGTCAAGACCAGACTTCAAACCCAGGGAATGAGATCTGGGGTTGTGCCTTATAGGAGCACGCTATCTGCTCTGAGGAGAATTGCTCATGAGGAGGGCATTCGGGGGTTGTACAGTGGCCTTGTACCTGCTCTTGCTGGTATCAGTCATGTTGCCATTCAGTTTCCAACATATGAGAAAATAAAATGTTACTTGGCAAACCAAGATAACACAGCCACAGATAAGCTTGGTGCTCGTGATGTTGCAATTGCGTCATCAGTTTCTAAAATTTTTGCGTCCACCCTAACATATCCGCATGAGGTTATACGTTCTAGATTGCAAGAGCAAGGATACCATTCAGGGAGGCGTTATTCCGGTATGGTTGACTGCATTCAGAAGGTCTTTCAGCAAGATGGCTTACCGGGATTTTACCGTGGATGTGCAACAAACCTGTTGAGGACAACCCCAGCAGCTGTAATCACATTCACTAGCTTTGAAATGATACACCGGTTTCTTGTTTCACTCATCCCCTCTGATCCGCAAACCCATGTATTGTGA 948 0.462 MSADTHVPASKVILCNAGAGAAAGVIAATFVCPLDVIKTRFQVHGLPQLANGSIKGSLIVGSLEQIFHKEGFRGMYRGLAPTVLALLPNWAVYFTMYEQFKSLLCSNDEHHHLSIGANMLAASAAGAATTIATNPLWVVKTRLQTQGMRSGVVPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKCYLANQDNTATDKLGARDVAIASSVSKIFASTLTYPHEVIRSRLQEQGYHSGRRYSGMVDCIQKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSLIPSDPQTHVL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5846g00028 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
Pral5846g00028 315 FunFam NAD+ transporter 110 306 - -
Pral5846g00028 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
Pral5846g00028 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 14 306 IPR044712 GO:0006862|GO:0055085
Pral5846g00028 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Pral5846g00028 315 Pfam Mitochondrial carrier protein 219 303 IPR018108 -
Pral5846g00028 315 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Pral5846g00028 315 Pfam Mitochondrial carrier protein 16 106 IPR018108 -
Pral5846g00028 315 Gene3D Mitochondrial carrier domain 3 108 IPR023395 -
Pral5846g00028 315 Gene3D Mitochondrial carrier domain 109 305 IPR023395 -
Pral5846g00028 315 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 109 - -
Pral5846g00028 315 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Pral5846g00028 315 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Pral5846g00028 315 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Pral5846g00028 315 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Pral5846g00028 315 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Pral5846g00028 315 SUPERFAMILY Mitochondrial carrier 16 297 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5846g00028 Pral-Chr5846 113274 117148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5846g00028 1 315 Chloroplast and Mitochondria Gene Families AT2G47490 78.413 6.28e-175 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5846g00028 K15115 - qsa:O6P43_010820 528.48