Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral5845g00007 | ATGGGAGAGGTTGTTATGTTTATTGACGATTTGAAATCAATTTCTGGGATTTCTCGATGCAGAATATGTCACGAAGAAGAATTTGAGAGCTCAAAAAGCTTTGAAGCTCCCTGTGCTTGTTCTGGGACCGTCAAGTTTGCTCACAGAGATTGCATACAGAGATGGTGCAATGAGAAAGGGAATACAATCTGTGAAATATGTCTCCAGCAATACGAACCTGGTTACACGGTTCCTCCCAAGAAATTGCGGATAAATGATGAAGCAATGACCATTCGAGAAAGCCTGCAAATTTCAAGAATGGAAGAAGAAGCGCTAAATGCAAGACTAGAGGCAATAGTTGAAAGAGTGGCAATAGAAAGTGAGTACTCCGAATGCACGTCTGCCGCAGATCGAAGTGCATCTTACTGTCGATTCCTGGCCTTGGCGTTTACACTTTTTATGCTCGTGAGACATCTTCTCGCTGTGCTTACGAGTGGAACAGAAGATTACCCATTTACACTGCTGACCGTTTTAATGCTGAGGGCTGGCGGAATTGTACTGCCCATGTTCATAATTATTAGAATGATTGGAGCGATCCAAAACATAATTCAGCGCCACTATCAGGATTCTGAAGACGGAGCAGCAATATCTGATGGGTACGACAACGAAAACGGGCCACTGCGTGATGTGATTTTTAGACACACATAG | 687 | 0.4338 | MGEVVMFIDDLKSISGISRCRICHEEEFESSKSFEAPCACSGTVKFAHRDCIQRWCNEKGNTICEICLQQYEPGYTVPPKKLRINDEAMTIRESLQISRMEEEALNARLEAIVERVAIESEYSECTSAADRSASYCRFLALAFTLFMLVRHLLAVLTSGTEDYPFTLLTVLMLRAGGIVLPMFIIIRMIGAIQNIIQRHYQDSEDGAAISDGYDNENGPLRDVIFRHT | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral5845g00007 | 228 | Pfam | Protein of unknown function (DUF3675) | 73 | 189 | IPR022143 | - | |
Pral5845g00007 | 228 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 10 | 77 | IPR013083 | - | |
Pral5845g00007 | 228 | Pfam | RING-variant domain | 20 | 67 | IPR011016 | GO:0008270 | |
Pral5845g00007 | 228 | CDD | RING_CH-C4HC3_MARCH | 20 | 67 | - | - | |
Pral5845g00007 | 228 | FunFam | E3 ubiquitin-protein ligase MARCH4 | 9 | 77 | - | - | |
Pral5845g00007 | 228 | SMART | ringv_2 | 19 | 68 | IPR011016 | GO:0008270 | |
Pral5845g00007 | 228 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 17 | 199 | IPR033275 | - | |
Pral5845g00007 | 228 | SUPERFAMILY | RING/U-box | 19 | 72 | - | - | |
Pral5845g00007 | 228 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 12 | 74 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral5845g00007 | Pral-Chr5845 | 27769 | 29960 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral5845g00007 | 20 | 67 | C3H Transcription Factor Family | AT5G05830 | 40.385 | 1.74e-06 | 45.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral5845g00007 | - | - | gmx:100797029 | 314.309 |