Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5844g00022 ATGGTGTCCAAAGCAGCAGACTCTGCGATCAAACTAAGAAAATCACATGGACAGCCAGCTAATGATGCTGTTGGAACCTTGTCAAGCAAGATTGATCAGCTTGAAAAGCAAATCCAGGCGGAGAGATTCGTATCAATTAAAGAAAAACTATTGAGGAATGGCAAGAAGGTACAATGTCATGTTTCCCATGTTGTCTCAGCAATATCAAAAAGAGATTCTTTGCATACACAGGAAAATAGGATTAATCAAATGCTTTCTTCAAGAATTGACCATCCTCTATTTAAGTTCAATGCTTTCTCTCAAGTTTCTGGTGACAAAGATCTCAACAACAGTCTAGATGTGATTTTTACAGCGAGTATCAAGATGCCTTATATCGAAAGATTACCACCATACACATCTTGGATATTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCTGTAGTAGGCAGAAGGCGTATCTACTACGATCAACATGGAAGTGAAGCGTTGATATGCAGTGACAGTGAGGAAGAGCTAACAGAACCTGAGGAAGATAAGCATGAATTTACTGATGCTGAAGATCGAATTTTATGGATGGCATTTGAGGAATATGGGTTAACTGAGGAAGTATTGGATGCTGTGAGCGAGTCTGTTGGAGGTACTAGACAGGAAATTCAGGATAGGTACAAAATTCTTAGGGAAAAGAACATGGAGAGGCAGGACCAGGAGTCTGAAAGTTCTGGAGATGTTGAATCTCGGATTGGCATAAGTTTGGAGGAAAGCTTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGCCGATGCATGATGTTTGATTGTCGCCTGCATGGATGTTCTCAACCCCTAATATATCCTAGTGAAAAGCAGCCAGTTTGGTTTGAACATGAAGAGGACAGGAAGCCATGCAGTGATCAATGTTACCTAAGGTTAAAGGCTGAGAAAATTTTGGAGGGAAATGAAGCCACAACTATGGAAGAGGGAGTATTGACTTTGGCATCCTCTGGTGCAGCAGAACTGGGAAACAAGAGTACTGCAACTACCTTGGTGGAGGAAAGATGCAATTCTATGAACGCAACACCTTTCCCAGTGGAAGTTGCTGGCTGTGGAGGTCTCAACTTAAATGTGCCTGTTGCAGAGAGTCTGGGGAAACGGAAGACCATAAATCAGTCAGATAAAGCACTGTCTGATTTAACATTGCTTACTGATGATTCACAGAGTTCTTGTAAAAAGCAAAAGAAAATCACAGATACTGATGTGGTCACTGCAGTTAATGATTATAACAGAGACCTAAATGTCAGTGCATGTGATGAAAAATGTATTATTGCTTCTGAATGTTTAAATGATTCTGTTGAGCGTGCTTCTAACAAACCACTACTTTCTGGGAGCACTTGTCCTGATGAACATGGAAATGTTGGGGATGGACCCAAAGATGGCATGGCTGAGGCAGAATTCAATGAATCCTCTTATTTCATGAATGAGCATGTTGAAGGCATGAAAAGTCTTTCAGAATGGAAACCTCTGGAGAAAGAGCTATACTTGAAGGGAGTAGAAATGTTTGGGAGAAACAGTTGCCTGATAACAAGGAATTTACTTTCTGGCCTGAAGACCTGCATGGAAGTAGCTACTTATATGCATGCTGGTGGAGCATCAATGCCCTACAGATCTAATGTTCCCCCAAATTCACTCAAGAATGACAACGGAAACACTGATGCAGAATGCACAGACCAAGAGATGCCAACCAGAGCAAGATTGATACGGAAAAGAGGCAAAACAAGGAAATTTAAATATTCCTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCAGATGGAAAAAACCAATCTTGCAAGCAATATACACCCTGTGGATGTCAATCAATGTGTGGAAAGCAATGCCCGTGCCTTCATAATGGAACTTGCTGTGAAAAATATTGTGGGTGCTCCAAAAGCTGCAAAAATCGATTCAGAGGTTGCCACTGTGCCAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGGCGCGAATGTGACCCAGATGTTTGTCGAAACTGCTGGGTTAGTTGTGGAGACGGTTCACTGGGAGAGCCACCTAGACGTGGAGATAGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCAGAGTCTGATGTCGCAGGATGGGGAGCATTCTTAAAGAATCCAGTTAACAAAAATGACTACCTAGGAGAATACACTGGGGAACTGATCTCCCACCGAGAAGCAGACAAGCGTGGAAAAATATATGATCGTGCAAACTCATCATTCCTTTTTGACTTGAATGATCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCTAACCACTCATCAAATCCAAACTGTTACGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTAGGCATCTTTGCCAAGGAACACATTGAAGCTAGTGAGGAGCTGTTCTATGATTATCGTTACGGTCCAGATCAAGCACCCGCTTGGGCTCGCAAACCTGAGTCTTCCAAGCGGGATGAATCGGCAGCCTCTCAAGGAAGGGCCAAAAAACACCAGTCTCATTGA 2622 0.423 MVSKAADSAIKLRKSHGQPANDAVGTLSSKIDQLEKQIQAERFVSIKEKLLRNGKKVQCHVSHVVSAISKRDSLHTQENRINQMLSSRIDHPLFKFNAFSQVSGDKDLNNSLDVIFTASIKMPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEDKHEFTDAEDRILWMAFEEYGLTEEVLDAVSESVGGTRQEIQDRYKILREKNMERQDQESESSGDVESRIGISLEESLSTALDSFDNLFCRRCMMFDCRLHGCSQPLIYPSEKQPVWFEHEEDRKPCSDQCYLRLKAEKILEGNEATTMEEGVLTLASSGAAELGNKSTATTLVEERCNSMNATPFPVEVAGCGGLNLNVPVAESLGKRKTINQSDKALSDLTLLTDDSQSSCKKQKKITDTDVVTAVNDYNRDLNVSACDEKCIIASECLNDSVERASNKPLLSGSTCPDEHGNVGDGPKDGMAEAEFNESSYFMNEHVEGMKSLSEWKPLEKELYLKGVEMFGRNSCLITRNLLSGLKTCMEVATYMHAGGASMPYRSNVPPNSLKNDNGNTDAECTDQEMPTRARLIRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDSQCGNMRLLLRQQQRILLAESDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPESSKRDESAASQGRAKKHQSH 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5844g00022 873 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 873 IPR025778 GO:0031519
Pral5844g00022 873 SMART set_7 724 845 IPR001214 GO:0005515
Pral5844g00022 873 CDD SET_EZH 724 840 - -
Pral5844g00022 873 Gene3D SET domain 625 841 IPR046341 -
Pral5844g00022 873 MobiDBLite consensus disorder prediction 846 873 - -
Pral5844g00022 873 MobiDBLite consensus disorder prediction 850 866 - -
Pral5844g00022 873 ProSiteProfiles CXC domain profile. 611 710 IPR026489 -
Pral5844g00022 873 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 24 872 IPR045318 GO:0006338|GO:0042054
Pral5844g00022 873 ProSiteProfiles SET domain profile. 724 839 IPR001214 GO:0005515
Pral5844g00022 873 MobiDBLite consensus disorder prediction 1 24 - -
Pral5844g00022 873 SUPERFAMILY SET domain 595 844 IPR046341 -
Pral5844g00022 873 Pfam CXC domain 663 694 IPR041355 -
Pral5844g00022 873 SMART CXC_2 659 696 IPR033467 -
Pral5844g00022 873 FunFam Putative histone-lysine N-methyltransferase EZH2 625 841 - -
Pral5844g00022 873 Coils Coil 217 237 - -
Pral5844g00022 873 Pfam SET domain 735 838 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5844g00022 Pral-Chr5844 115655 123856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5844g00022 720 842 C2H2 Transcription Factor Family AT2G23740 27.857 6.27e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral5844g00022 SET 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5844g00022 - - gmx:100808730 1263.44