Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5844g00021 ATGGTGTCCAAAGCAGCAGACTCTGCGATCAAACTAAGAAAATCACATGGACAGCCAGCTAATGATGCTGTTGGAACCTTGTCAAGCAAGATTGATCAGCTTGAAAAGCAAATCCAGGCGGAGAGATTCGTATCAATTAAAGAAAAACTATTGAGGAATGGCAAGAAGGTACAATGTCATGTTTCCCATGTTGTCTCAGCAATATCAAAAAGAGATTCTTTGCATACACAGGAAAATAGGATTAATCAAATGCTTTCTTCAAGAATTGACCATCCTCTATTTAAGTTCAATGCTTTCTCTCAAGTTTCTGGTGACAAAGATCTCAACAACAGTCTAGATGTGATTTTTACAGCGAGTATCAAGATGCCTTATATCGAAAGATTACCACCATACACATCTTGGATATTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCTGTAGTAGGCAGAAGGCGTATCTACTACGATCAACATGGAAGTGAAGCGTTGATATGCAGTGACAGTGAGGAAGAGCTAACAGAACCTGAGGAAGATAAGCATGAATTTACTGATGCTGAAGATCGAATTTTATGGATGGCATTTGAGGAATATGGGTTAACTGAGGAAGTATTGGATGCTGTGAGCGAGTCTGTTGGAGGTACTAGACAGGAAATTCAGGATAGGTACAAAATTCTTAGGGAAAAGAACATGGAGAGGCAGGACCAGGAGTCTGAAAGTTCTGGAGATGTTGAATCTCGGATTGGCATAAGTTTGGAGGAAAGCTTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGCCGATGCATGCAGATGTTTGATTGTCGCCTGCATGGATGTTCTCAACCCCTAATATATCCTAGTGAAAAGCAGCCAGTTTGGTTTGAACATGAAGAGGACAGGAAGCCATGCAGTGATCAATGTTACCTAAGGTTAAAGGCTGAGAAAATTTTGGAGGGAAATGAAGCCACAACTATGGAAGAGGGAGTATTGACTTTGGCATCCTCTGGTGCAGCAGAACTGGGAAACAAGAGTACTGCAACTACCTTGGTGGAGGAAAGATGCAATTCTATGAACGCAACACCTTTCCCAGTGGAAGTTGCTGGCTGTGGAGGTCTCAACTTAAATGTGCCTGTTGCAGAGAGTCTGGGGAAACGGAAGACCATAAATCAGTCAGATAAAGCACTGTCTGATTTAACATTGCTTACTGATGATTCACAGAGTTCTTGTAAAAAGCAAAAGAAAATCACAGATACTGATGTGGTCACTGCAGTTAATGATTATAACAGAGACCTAAATGTCAGTGCATGTGATGAAAAATGTATTATTGCTTCTGAATGTTTAAATGATTCTGTTGAGCGTGCTTCTAACAAACCACTACTTTCTGGGAGCACTTGTCCTGATGAACATGGAAATGTTGGGGATGGACCCAAAGATGGCATGGCTGAGGCAGAATTCAATGAATCCTCTTATTTCATGAATGAGCATGTTGAAGGCATGAAAAGTCTTTCAGAATGGAAACCTCTGGAGAAAGAGCTATACTTGAAGGGAGTAGAAATGTTTGGGAGAAACAGTTGCCTGATAACAAGGAATTTACTTTCTGGCCTGAAGACCTGCATGGAAGTAGCTACTTATATGCATGCTGGTGGAGCATCAATGCCCTACAGATCTAATGTTCCCCCAAATTCACTCAAGAATGACAACGGAAACACTGATGCAGAATGCACAGACCAAGAGATGCCAACCAGAGCAAGATTGATACGGAAAAGAGGCAAAACAAGGAAATTTAAATATTCCTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCAGATGGAAAAAACCAATCTTGCAAGCAATATACACCCTGTGGATGTCAATCAATGTGTGGAAAGCAATGCCCGTGCCTTCATAATGGAACTTGCTGTGAAAAATATTGTGGGTGCTCCAAAAGCTGCAAAAATCGATTCAGAGGTTGCCACTGTGCCAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGGCGCGAATGTGACCCAGATGTTTGTCGAAACTGCTGGGTTAGTTGTGGAGACGGTTCACTGGGAGAGCCACCTAGACGTGGAGATAGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCAGAGTCTGATGTCGCAGGATGGGGAGCATTCTTAAAGAATCCAGTTAACAAAAATGACTACCTAGGAGAATACACTGGGGAACTGATCTCCCACCGAGAAGCAGACAAGCGTGGAAAAATATATGATCGTGCAAACTCATCATTCCTTTTTGACTTGAATGATCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCTAACCACTCATCAAATCCAAACTGTTACGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTAGGCATCTTTGCCAAGGAACACATTGAAGCTAGTGAGGAGCTGTTCTATGATTATCGTTACGGTCCAGATCAAGCACCCGCTTGGGCTCGCAAACCTGAGTCTTCCAAGCGGGATGAATCGGCAGCCTCTCAAGGAAGGGCCAAAAAACACCAGTCTCATTGA 2625 0.4232 MVSKAADSAIKLRKSHGQPANDAVGTLSSKIDQLEKQIQAERFVSIKEKLLRNGKKVQCHVSHVVSAISKRDSLHTQENRINQMLSSRIDHPLFKFNAFSQVSGDKDLNNSLDVIFTASIKMPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEDKHEFTDAEDRILWMAFEEYGLTEEVLDAVSESVGGTRQEIQDRYKILREKNMERQDQESESSGDVESRIGISLEESLSTALDSFDNLFCRRCMQMFDCRLHGCSQPLIYPSEKQPVWFEHEEDRKPCSDQCYLRLKAEKILEGNEATTMEEGVLTLASSGAAELGNKSTATTLVEERCNSMNATPFPVEVAGCGGLNLNVPVAESLGKRKTINQSDKALSDLTLLTDDSQSSCKKQKKITDTDVVTAVNDYNRDLNVSACDEKCIIASECLNDSVERASNKPLLSGSTCPDEHGNVGDGPKDGMAEAEFNESSYFMNEHVEGMKSLSEWKPLEKELYLKGVEMFGRNSCLITRNLLSGLKTCMEVATYMHAGGASMPYRSNVPPNSLKNDNGNTDAECTDQEMPTRARLIRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDSQCGNMRLLLRQQQRILLAESDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPESSKRDESAASQGRAKKHQSH 874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5844g00021 874 MobiDBLite consensus disorder prediction 847 874 - -
Pral5844g00021 874 ProSiteProfiles CXC domain profile. 612 711 IPR026489 -
Pral5844g00021 874 ProSiteProfiles SET domain profile. 725 840 IPR001214 GO:0005515
Pral5844g00021 874 FunFam Putative histone-lysine N-methyltransferase EZH2 626 842 - -
Pral5844g00021 874 SMART set_7 725 846 IPR001214 GO:0005515
Pral5844g00021 874 SMART CXC_2 660 697 IPR033467 -
Pral5844g00021 874 Gene3D SET domain 626 842 IPR046341 -
Pral5844g00021 874 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 24 873 IPR045318 GO:0006338|GO:0042054
Pral5844g00021 874 SUPERFAMILY SET domain 596 845 IPR046341 -
Pral5844g00021 874 MobiDBLite consensus disorder prediction 1 24 - -
Pral5844g00021 874 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 874 IPR025778 GO:0031519
Pral5844g00021 874 Pfam SET domain 736 839 IPR001214 GO:0005515
Pral5844g00021 874 CDD SET_EZH 725 841 - -
Pral5844g00021 874 Coils Coil 217 237 - -
Pral5844g00021 874 Pfam CXC domain 664 695 IPR041355 -
Pral5844g00021 874 MobiDBLite consensus disorder prediction 851 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5844g00021 Pral-Chr5844 115655 123856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5844g00021 721 843 C2H2 Transcription Factor Family AT2G23740 27.857 6.07e-09 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral5844g00021 SET 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5844g00021 - - gmx:100808730 1258.82