Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5844g00020 ATGGGGGACGATGCAGCTCTGAATTGCAATGGAACCCAGGGCGGTCATAAGTTTGCACCAGAGGAGGCTGTGTTCCACGAGGGAAACAGTCTTCTAGACATGAAATTTACAGAAGAGATGAATGCTCTCCCTATCGAGAATCACGAGAAAGAAACATATTCACATCAAAATCGAAGTCATGAACCTAAATTTGACGACTTGATGCTGGAAGAGTTCAGCTTTGACTTTCTTCTGCAACCGCCACAAGCGTTTGAGGAAACGGTTGAGGTAAACAATAAAGCAGTGGCGAGTTCTGAATCCGTCAAGTACAACGATAAGCCAGTCCCTCCAGCATCTTCAATCCTGGCTTCCTTGGAGCTCTTAAACAATTACAAAAGCAGGCTCAGGAGACTGAAGGGGCAAAATATCAACGACACAACCGAGACTGATTGCTCAGTGGGTCGCCAGAAGTTGTCGACTGCAGAAATAATAAGAGTCACTGGAGAAAGGTACGTCCAATTCTCAGCCTATTGGGACGATAATACTTGCATGCCTACGCACCCATATGGGTTTGGTCTGGGTGGTCTGTCTGACGAAGAGAACAAAGACGTTGAACTGGCTCAATTTCTTCTAACTGCAGCCGAGAGGGTAAGCTGCGAACAATACGAAGGAGCAAACAGGATCCTTTTACAATGTGAATTGAATTCATCCGCTTGTGCAACCCCAGTTCAGAAAATAGTCTACCATTTCGCTCAAGCTCTGCGAGAGAGGATCCACAAGGAAACAGGAATGGTAACAACACTCGACGGATATAAGAAAACCGAAAGGCACGAATTACTTGAGAAGATCAATTATAATTTACCGTTTATATCTACATGCTTCCGAAAGATTCCATTCTGTCAAGCAATGCAAATAGCCGGCGTACAGGCTATGATAGAGCACCTCGCGTCAGGGACCAAAATCCATCTCATCGATCTTGAAATCAGATGGGGAGTGCAATGGACGGCTCTGATGCAAGCCCTCGCGGAGCGTCGTCAAAGACCCCTTCAGCTTCTCACCATAACTGCTATTGGATTCGAAGGCAGAAACGAGTTAGAAGAGACAGGCGAGTGTTTAGCCGATTTTGCAGGATCCTTAAACTTGCCCTTCTCATTTAAAGTGGTTTTTGTGACGGACATGATCGAAATCAGGGAAGAACAATTCGAGATCAATGACGATGAAGCCGTAGCGGTGTACGCTCCCTGCGTTCTGGCGACAATGATACCAAGGCCAGAGTGCTTGGAAAACTTGATGAGCATACTGAGGAAAAAGAAACCACGCATAATGATAGTGCATGAGACGGAAGCAAACAGTAACTCGCAGTTCTTCGGGAAGCGCTTCGTGGAAGCGTTGTTCTTCTTCTCGGCTTATATTGATTGCACTGAAACATGCATGAAAGATGAGGCAGAATGCAGAGTGACTATGGGTGCTTTATTCAGCGACAGGATAAGGAACGTTGTGGCCAGGGAAGGCAAAGAAAGGACACAGAGGCATGTGAAGGTGGATGTTTGGAGAAGGTTCTTTGCGAGGTACAGAGTGGTGGAGACAAGTTTTAGCGAATCGTCGCTGTAA 1590 0.4616 MGDDAALNCNGTQGGHKFAPEEAVFHEGNSLLDMKFTEEMNALPIENHEKETYSHQNRSHEPKFDDLMLEEFSFDFLLQPPQAFEETVEVNNKAVASSESVKYNDKPVPPASSILASLELLNNYKSRLRRLKGQNINDTTETDCSVGRQKLSTAEIIRVTGERYVQFSAYWDDNTCMPTHPYGFGLGGLSDEENKDVELAQFLLTAAERVSCEQYEGANRILLQCELNSSACATPVQKIVYHFAQALRERIHKETGMVTTLDGYKKTERHELLEKINYNLPFISTCFRKIPFCQAMQIAGVQAMIEHLASGTKIHLIDLEIRWGVQWTALMQALAERRQRPLQLLTITAIGFEGRNELEETGECLADFAGSLNLPFSFKVVFVTDMIEIREEQFEINDDEAVAVYAPCVLATMIPRPECLENLMSILRKKKPRIMIVHETEANSNSQFFGKRFVEALFFFSAYIDCTETCMKDEAECRVTMGALFSDRIRNVVAREGKERTQRHVKVDVWRRFFARYRVVETSFSESSL 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5844g00020 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 137 526 IPR005202 -
Pral5844g00020 529 Pfam GRAS domain family 200 520 IPR005202 -
Pral5844g00020 529 ProSiteProfiles GRAS family profile. 190 529 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5844g00020 Pral-Chr5844 112816 114405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5844g00020 189 511 GRAS Transcription Factor Family AT3G03450 29.969 3.79e-36 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral5844g00020 GRAS 7.7e-65 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5844g00020 - - gmx:100791952 541.576