Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5844g00018 ATGGAGGGCACTATCTCGCCTAAACTTGAGTCAAAAGCATCTCAAGCGCCCACACCAGAAATTCAAGAATCCAAAAAAAGGAAAATGGTTCAGAAAACAGTTGTGAGGGTGAAAGTTGGAGAAAATGTTAGTAAAGTGAAGAATGAAGGGCTACCATCGGACTCATGGTCTTGGAGGAAATATGGACAAAAGCCTATTAAAGGATCCCCTTATCCAAGAGGCTATTACAGGTGCAGCACATCCAAAGGTTGTTCGGCCAAAAAGCAAGTAGAAAGGTGCAGAACAGATGCTTCAATGCTCATTGTCACCTACACTTCTTCACATAATCATCCAGCTCCAGAATTACCCCGCAAAGAATCGAAAACCCAAGCTACTGAAGATCTCTCACCTGCTACTTCAAAGGCGAAAGACGACCAAGACCACGAGGAAGAGAAGAAAGATCTTCAACTTGCAACAGCTAGCGATCAAGGTGCAAATGAAGAAAATTTTCATTACCTGCAATCGCCGATAGGCTGTCCTGAAGACATTATTATTGACCGAGAGGATCTTTTCAAATTGAACCCAGAGAAAACGCAAGAGAGGATGGATCTTCTCTTGGAGGAAGAGCCCCTCGGTTATTCTCAGCACAAGAACCTCTCGACGCTCAAATCGGAGGAACTTGACTTCTTCGACGAGCTTGAAGAGCTACCCATGTCTCCGTCTTTGTTGAAGTTGATGAGGAACAATTTTTCCGATGAAAGGATTCCGGTTGCCCCGTCATGA 762 0.4436 MEGTISPKLESKASQAPTPEIQESKKRKMVQKTVVRVKVGENVSKVKNEGLPSDSWSWRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIVTYTSSHNHPAPELPRKESKTQATEDLSPATSKAKDDQDHEEEKKDLQLATASDQGANEENFHYLQSPIGCPEDIIIDREDLFKLNPEKTQERMDLLLEEEPLGYSQHKNLSTLKSEELDFFDELEELPMSPSLLKLMRNNFSDERIPVAPS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5844g00018 253 Gene3D WRKY domain 37 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5844g00018 253 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 14 234 IPR044810 GO:0003700
Pral5844g00018 253 SMART WRKY_cls 52 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5844g00018 253 SUPERFAMILY WRKY DNA-binding domain 48 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5844g00018 253 MobiDBLite consensus disorder prediction 47 72 - -
Pral5844g00018 253 MobiDBLite consensus disorder prediction 1 29 - -
Pral5844g00018 253 MobiDBLite consensus disorder prediction 131 150 - -
Pral5844g00018 253 FunFam WRKY transcription factor 65 26 113 - -
Pral5844g00018 253 MobiDBLite consensus disorder prediction 104 162 - -
Pral5844g00018 253 Pfam WRKY DNA -binding domain 54 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5844g00018 253 ProSiteProfiles WRKY domain profile. 47 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5844g00018 Pral-Chr5844 103958 105532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5844g00018 24 235 WRKY Transcription Factor Family AT4G01250 41.315 1.37e-37 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5844g00018 WRKY 9.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5844g00018 - - gmx:100127368 309.686