Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5844g00007 ATGGGAGCTTCTTCGCAGCCTTTCCCTGTTTTCCTGTCCGTGAAAAACCAGCTTCGAGAAGCTGATCAAGAAGACAGGAATTTATCGTATGGGTATCTGGGGAGCAAAGCGGGGGCAGGGCGAGGCATGAAGCACAGGCTGAGGAGCGGGGGGAGGAGAAAGGTTTTAATGAAGAGGAAGGCTCGCACGATAGGAGGTTCTAGAAGACAAGGGGCCATGGGGATTGAGACGAGGATCAGAACTCTGAAGAGGCTTATACCCAGCAGCAACAGCGAGTCCGTGGGGTTGGATGGGCTCTTCAGGGACACAGCCGAGTACATTTTGTCGTTACAAACGAGAGTGAGAGTCATGCAGATTATGGTTGACGTACTGGCAGTTTCTGACGGGTGA 390 0.5256 MGASSQPFPVFLSVKNQLREADQEDRNLSYGYLGSKAGAGRGMKHRLRSGGRRKVLMKRKARTIGGSRRQGAMGIETRIRTLKRLIPSSNSESVGLDGLFRDTAEYILSLQTRVRVMQIMVDVLAVSDG 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5844g00007 129 CDD bHLH_AtIBH1_like 64 121 IPR044549 GO:0006355
Pral5844g00007 129 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 41 124 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5844g00007 Pral-Chr5844 47429 47986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5844g00007 54 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 46.053 7.17e-16 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5844g00007 - - gmx:100527452 106.301