Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5844g00006 ATGGAGAAGAAGGGTGTCAAGAAGGAGGAAGCAGTTGGATCCTCTTCGTTTGGGGATTATAATTCAAACGGCTTCCCACTTTCGAGTGTCTTTGATTTTCATGAAGTGGAAAAGAGCTCTCTAGGGTTTATGGAGTTACTGGGTGTGCAGGAGCAGGACTATGGTTCCTTTGATTTGCCCCCGCAACTATTTCCTTCCGACCTCAAAAATCGATGTGCCGCTGCAAAAAACTACTGCGAGCCGTTGAATCAACAGCCTGCCACTCCAAACTCTTCATCCATTTCATCTGCGTCCAGTGAGGCACTGATTGATGAACACACTAAAACTGTAGATCAACGAGGAGATGAACAACCAAAGACCAAGAACCAGTTGAAGGCCAAGAAGACAAGTCAGAAGAAACAGAGGGAACCGAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGATGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCCGTGAAGAACAGCCCCTTTCCCAGAAGCTACTACCGTTGCACCAGTGCTTCATGTAATGTGAAGAAACGAGTGGAACGATCCTTCACTGATCCAAGCATTGTTGTCACGACCTATGAAGGCCAACACACACATACAAGCCCACTCATGCCTCGTTCGACTCTTGCCGGAGCTTTGGTACCAGCGGTGGTCTCCGCCGGATGTGGTTCAGCTGCAACGCCGGGAAACTTATTATCCCCGCAGTATCATGAGCAGCTCCAACATCATAATGATCACCAATTCCTAGCGAACACATTGTCGTCTTTGGGTTTTCCTCGCATTTGTGGTTCAAAGAGTAGTATCGCCGCTTTCCTCAAGAGAGGATGCCTTGTAATCCAGGGACCAATGCTTTTTTAA 882 0.4762 MEKKGVKKEEAVGSSSFGDYNSNGFPLSSVFDFHEVEKSSLGFMELLGVQEQDYGSFDLPPQLFPSDLKNRCAAAKNYCEPLNQQPATPNSSSISSASSEALIDEHTKTVDQRGDEQPKTKNQLKAKKTSQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTSASCNVKKRVERSFTDPSIVVTTYEGQHTHTSPLMPRSTLAGALVPAVVSAGCGSAATPGNLLSPQYHEQLQHHNDHQFLANTLSSLGFPRICGSKSSIAAFLKRGCLVIQGPMLF 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5844g00006 293 Gene3D WRKY domain 136 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral5844g00006 293 MobiDBLite consensus disorder prediction 108 137 - -
Pral5844g00006 293 PIRSF WRKY_txn_fact_IIc 1 285 IPR017396 GO:0003700
Pral5844g00006 293 FunFam WRKY transcription factor 57 136 210 - -
Pral5844g00006 293 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 84 243 IPR044810 GO:0003700
Pral5844g00006 293 ProSiteProfiles WRKY domain profile. 145 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5844g00006 293 SMART WRKY_cls 150 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5844g00006 293 MobiDBLite consensus disorder prediction 1 23 - -
Pral5844g00006 293 Pfam WRKY DNA -binding domain 151 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral5844g00006 293 SUPERFAMILY WRKY DNA-binding domain 142 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5844g00006 Pral-Chr5844 39366 40891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5844g00006 17 244 WRKY Transcription Factor Family AT2G47260 52.174 6.46e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral5844g00006 WRKY 1.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5844g00006 - - pcin:129306881 454.521