Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5842g00011 ATGGCCGTCAAAACCATCCCGCCGACCGATGCTCTCTGTATTACTCCCACCGCCGGCATCGACTACCTGAGCAGCCGGGTCTTGCCTGAACCTGATGTTTTTATTCACACATCCAGTGGCGCGCGCATTCCCGCGCACACTAGCATTCTGGCGTCAGTGTCGCCGGTTTTGGAGAATATCATAGATCAGCCACGCAAGCATCGGAGCTGTGAGAGAATCATTCAAATACTCGGTGTTCCTTGCGATGCCGTCATCGCTTTTCTCGGCTTCCTTTATTGTTCCAGGTGCGCGGATGAGCAGATGGAGAAGTATGGGATTCATCTGCTCGCATTGTCGCACGTGTATTTGGTGCCACAACTGAAGCAGAGATGCATCAAGGTGCTTGCCGAACGGTTAACGATCGAGAATGTGGTGGATTTGCTCCAACTCGCTAGGCTCTGCGACGCGCCCGATCTTTACATCAAGTGTATGAAGCTACTCACCAGTCACTTCAAATCTGTGGAAGCGACAGAGGGCTGGAAATTCTTGCAGAAGCATGACCCATGGCTTGAGCTCGACATCCTCCGGTTCATGGATGAGGACGAATCGAGGAAGAAGAAATCGAAGAAGCAGAGGGAGGAGCTGAGGTTGTACGCAGAGCTGAGCGAGGCGATGGAGTGTCTAGAACACATATGCACCGAAGGGTGCACCGACGTTGGGCCTTACGGCGTGGAGCTCCAGAAAGACAGGAGGCCGTGCAGCAAATTCGCCACGTGTCACGGGCTTCAGCTCTTAATCAAGCACTTTGCTACGTGTAATAAGAAGATGAACGGAGGGTGCTTACGCTGCAAGCGAATGTGGCAGCTCTTCCGACTTCATTCCTGCATTTGCCAGCAAACCCATTCTTGCAAGGTTCCTCTTTGCAGGGAAATGCAAATGAAAATGCAGCAAGAGAAAAGGAAAGACGATCCAAGGTGGAAACTACTGGCCAGAAAAGTGGCCTCTGCTAGAGTCATGTCTACACTCTCTTTGCCGAAGAGGAAGAGAGATGATGAAATTAGAATAAACATGAACAATTATGCGATTAAAAGTTTCAAATTAAAATGA 1086 0.5018 MAVKTIPPTDALCITPTAGIDYLSSRVLPEPDVFIHTSSGARIPAHTSILASVSPVLENIIDQPRKHRSCERIIQILGVPCDAVIAFLGFLYCSRCADEQMEKYGIHLLALSHVYLVPQLKQRCIKVLAERLTIENVVDLLQLARLCDAPDLYIKCMKLLTSHFKSVEATEGWKFLQKHDPWLELDILRFMDEDESRKKKSKKQREELRLYAELSEAMECLEHICTEGCTDVGPYGVELQKDRRPCSKFATCHGLQLLIKHFATCNKKMNGGCLRCKRMWQLFRLHSCICQQTHSCKVPLCREMQMKMQQEKRKDDPRWKLLARKVASARVMSTLSLPKRKRDDEIRINMNNYAIKSFKLK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5842g00011 361 SMART BTB_4 31 132 IPR000210 GO:0005515
Pral5842g00011 361 FunFam BTB/POZ and TAZ domain-containing protein 2 133 203 - -
Pral5842g00011 361 SMART TAZ_2 208 302 IPR000197 -
Pral5842g00011 361 Gene3D - 133 206 - -
Pral5842g00011 361 FunFam BTB/POZ and TAZ domain-containing protein 2 204 330 - -
Pral5842g00011 361 Gene3D TAZ domain 207 312 IPR035898 -
Pral5842g00011 361 SUPERFAMILY POZ domain 32 162 IPR011333 -
Pral5842g00011 361 Gene3D Potassium Channel Kv1.1; Chain A 28 132 IPR011333 -
Pral5842g00011 361 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 29 342 IPR044513 -
Pral5842g00011 361 CDD BACK 133 176 - -
Pral5842g00011 361 Pfam TAZ zinc finger 215 301 IPR000197 -
Pral5842g00011 361 SUPERFAMILY TAZ domain 208 305 IPR035898 -
Pral5842g00011 361 Pfam BTB/POZ domain 31 130 IPR000210 GO:0005515
Pral5842g00011 361 ProSiteProfiles BTB domain profile. 31 100 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5842g00011 Pral-Chr5842 72367 75752 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Pral5842g00011 BTB 1.8e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5842g00011 - - cam:101496955 529.635