LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral5842g00002	ATGGCTCTCCCTCCTGCAAAATCACACCTCTTACTCTTTTCATTATTCTCCCTTCTCTTCATCATCCATGCCAAAATTGATATCGATCCTTCAGATCTCAAAGCTTTCTTGGCTTTTCAGAAGCAGTTGGGTTTCAACGGTCAACTCCACCCGTTGACCGCACACCCATGTAACACCGACGGTGTTTTCTGCGAGAGGAGGCTTTCCAGTAATGAGAGCTATGCTCTCAGAATCACCAGAATCATCTTCAAGTCTAAGAAGCTTAATGGTGTCCTGTCCCCAGCGATTGGGCGTCTCTCTGAGCTCAAGGAGCTTTCTCTTTCGGGCAACCAACTCGCGAGCCAGATTCCACCTCATATAGTTGACTGCCGGAAGCTGGAAGTTCTTGACCTCGGAAACAACCACTTCTCCGGCGAGGTCCCGTCTGAATTGTCCTCCCTCATTCGCCTTCGAGTCCTTGACATATCTTCCAACAAATTTTCTGGGAATTTGAATTTCTTGAAGTATTTCCCCAACCTGGAAAGTCTCTCCGTGGCGGACAATCTCTTCACGGGGAGAATTCCGGCGTCTATACGTTCATTTCGCAATCTCCAACGGTTCAACTTTTCTGGGAATCACTTCCTTGAAATTCCCGGGCCATTGATGAAGAGATTTGGACACTCAGCATCTGATATCCCCAGAAGATACATCCTTGCTGAGAATTCAGCTCCAACAACAAGTGAGGGAGCTTTTGCTCATGCTCCAAAATCCAGTAGGAACCATTCAAATCATTCAGGGGCTCAAGCTTCTCCAGCTCCAGCTCCAACAGCGCAACATCACGAACACAAGGAAAAAAGGAGGAAACTAGGTGGGTGGATTCTCGGATTCCTAGCAGGAGCATTCGCTGGGAGCATATCTGGGTTAATATTTTCTTTGCTGTTTAAGTTGGCCGTAGCTGTGATCAAAGGAGGAGGGAAGAGCACAGGCCCTGCAATTTATAGTCCATTGATTGCAAAGGCAGAGGACTTGGCTTTCCTGGAGAAAGAAGATGGAGTGAGTTCATTAGAAATCATTGGAAAAGGTGGGTGTGGAGAAGTTTACAAGGCTGAATTGCCAGGAAGCAACAAACTTGTTGCTATAAAGAAGGTCAAGCAACCTCCAAAAGATGCAGCCGAACTGTCTGAAGAAGACAGTAAGATTTTGAACAAAAAAATGCGTCAAATTCGCTCGGAGATCAACACGGTTGGTCAAATTCGACATCGAAACCTTCTACCTCTGCTAGCTCACGTGTCAAGGCCGGATTGCCACTACCTTGTATACGAGTACATGAAGAACGGAAGCTTACAAGATGTGCTGAATCAAGTTCAAGCAGGCGTAAGAGAGTTAGATTGGTTAGCACGTCACAAGATTACAGTTGGCGTAGCAGCTGGCCTCGAGTACCTTCACATGCACCATACTCCTCGTATAATTCACAGAGATCTCAAGCCCGGAAATATTCTTCTTGATGATGATATGGAAGCTCGAATTGCAGATTTTGGGCTTGCAAAAGCAATGCCAGAAGCTTATACCCATGTCTCAACTTCAAATGTGGCAGGAACGATGGGTTACATAGCACCAGAATATCACCAAACAATGAAATTCACTGACAAGTGCGACATATACAGCTTTGGGGTTGTTCTTGGCATCTTGGTGATGGGAAAGATTCCATCTGATGCGTTCTTTCAGGAAACAGAGGAGCTGAGTTTGGTGAAGTGGATGAGGAATGTGATGACTTCAGCCAATCCTACTAGGGCCATTGATGAAAAGCTCTTAGGCAATGGATATGAAGAGCAGATGCTTCTGGTTCTCAAGATTGCTTGCTTTTGTACTCTTGATGATCCCAAGGAGAGGCCTAACAGTAAGGATATCAGATGCATGTTGTCCCAAATCAAACACTGA	1917	0.457	MALPPAKSHLLLFSLFSLLFIIHAKIDIDPSDLKAFLAFQKQLGFNGQLHPLTAHPCNTDGVFCERRLSSNESYALRITRIIFKSKKLNGVLSPAIGRLSELKELSLSGNQLASQIPPHIVDCRKLEVLDLGNNHFSGEVPSELSSLIRLRVLDISSNKFSGNLNFLKYFPNLESLSVADNLFTGRIPASIRSFRNLQRFNFSGNHFLEIPGPLMKRFGHSASDIPRRYILAENSAPTTSEGAFAHAPKSSRNHSNHSGAQASPAPAPTAQHHEHKEKRRKLGGWILGFLAGAFAGSISGLIFSLLFKLAVAVIKGGGKSTGPAIYSPLIAKAEDLAFLEKEDGVSSLEIIGKGGCGEVYKAELPGSNKLVAIKKVKQPPKDAAELSEEDSKILNKKMRQIRSEINTVGQIRHRNLLPLLAHVSRPDCHYLVYEYMKNGSLQDVLNQVQAGVRELDWLARHKITVGVAAGLEYLHMHHTPRIIHRDLKPGNILLDDDMEARIADFGLAKAMPEAYTHVSTSNVAGTMGYIAPEYHQTMKFTDKCDIYSFGVVLGILVMGKIPSDAFFQETEELSLVKWMRNVMTSANPTRAIDEKLLGNGYEEQMLLVLKIACFCTLDDPKERPNSKDIRCMLSQIKH	638

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral5842g00002	638	MobiDBLite	consensus disorder prediction	240	265	-	-
	Pral5842g00002	638	SUPERFAMILY	Protein kinase-like (PK-like)	340	633	IPR011009	-
	Pral5842g00002	638	Gene3D	Phosphorylase Kinase; domain 1	345	439	-	-
	Pral5842g00002	638	Pfam	Leucine rich repeat	101	160	IPR001611	GO:0005515
	Pral5842g00002	638	FunFam	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1	332	435	-	-
	Pral5842g00002	638	ProSiteProfiles	Protein kinase domain profile.	345	638	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5842g00002	638	Gene3D	Ribonuclease Inhibitor	32	166	IPR032675	-
	Pral5842g00002	638	Gene3D	Ribonuclease Inhibitor	167	221	IPR032675	-
	Pral5842g00002	638	SUPERFAMILY	L domain-like	44	211	-	-
	Pral5842g00002	638	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	482	494	IPR008271	GO:0004672\|GO:0006468
	Pral5842g00002	638	FunFam	Leucine-rich repeat receptor-like protein kinase	436	638	-	-
	Pral5842g00002	638	Gene3D	Transferase(Phosphotransferase) domain 1	440	638	-	-
	Pral5842g00002	638	CDD	STKc_IRAK	351	636	-	-
	Pral5842g00002	638	SMART	serkin_6	345	637	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral5842g00002	638	MobiDBLite	consensus disorder prediction	240	277	-	-
	Pral5842g00002	638	FunFam	Leucine-rich repeat receptor protein kinase EMS1	70	167	-	-
	Pral5842g00002	638	PANTHER	LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1	67	637	-	-
	Pral5842g00002	638	Pfam	Protein kinase domain	347	627	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral5842g00002	Pral-Chr5842	20027	22190	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral5842g00002	1	638	Receptor kinase-like Gene Family	AT2G31880	61.692	0.0	804

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-XI-2	Pral5842g00002		Pkinase	4.9e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral5842g00002	-		-	qsa:O6P43_022621	956.051