Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5841g00007 ATGGCAGAAACATGCCTGCTTTCTTTGCCATCCCTGTTCTGCAGCAAAACCAACCATCCCCATTTTTCAGCAATTCCTTCTAAACCCCATAAGCTTCAGCTTTCGTGTTCCAACTCTACACTCCTTTTACCTTCTCTATCTCTCATCAGGAGAACTCATTCTTCCTCTATATTGACATTTGTGGCACAGACTTCTGATTGGGCTCAGCAAGAAGCTGACAACACAGTTGCTGTTGGGGATGACGAAGCCGCGTGGGAAAATCAAGAGGTCGACAATACTGAAGCTGGCCTTTCCGACTGGGAGGCTGAGGGTGGCGAGGGCGAAGGAGAGGGTGGTGAAGACGGGGTTTTTGAGGAAGGGGAATACGTAGAACCGCCTGAAGATGCCAAAATCTATGTCGGTAATTTGCCTTACGATGTTGATAGCCAAAAATTGGCTATGCTTTTTGAGCAAGCTGGAACTGTTGAAATTGCCGAGGTGATTTATAACAGGGAGACTGACCAAAGTCGTGGGTTCGGATTTGTGACGATGAGCACGGTTGAAGAAGCCGAGAAAGCTGTAGAAAAGTTCAAACGCTACGATTTAGATGGAAGACTGCTGACTGTTAATAAGGCTGCTCCGAGAGGATCACGACCTGAACGTCCACCTCGTGCCTTTGAACCTGCTTTCAGAATCCACGTTGGCAACTTGCCGTGGGATGTGGATAATGCTCGCCTGGAGCAAATCTTCAGTGAACAGGGTACGGTTGTGAATGCCCGGATAGTTTATGACAGAGAGACTGGCCGATCACGTGGTTTTGGCTTCGTCACAATGGCCAGTGGGACTGAAATGAATGATGCTATTGCGGCCCTCGATGGTCAGAGTGTGGATGGGAGAGCGATCAGAGTGAGTGCTGCTGAGGAAAGGCCCAGGCGTGGCTCCTTTTGA 927 0.4919 MAETCLLSLPSLFCSKTNHPHFSAIPSKPHKLQLSCSNSTLLLPSLSLIRRTHSSSILTFVAQTSDWAQQEADNTVAVGDDEAAWENQEVDNTEAGLSDWEAEGGEGEGEGGEDGVFEEGEYVEPPEDAKIYVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEKFKRYDLDGRLLTVNKAAPRGSRPERPPRAFEPAFRIHVGNLPWDVDNARLEQIFSEQGTVVNARIVYDRETGRSRGFGFVTMASGTEMNDAIAALDGQSVDGRAIRVSAAEERPRRGSF 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5841g00007 308 Gene3D - 214 308 IPR012677 -
Pral5841g00007 308 Gene3D - 69 213 IPR012677 -
Pral5841g00007 308 CDD RRM1_PSRP2_like 130 209 - -
Pral5841g00007 308 FunFam 31 kDa ribonucleoprotein, chloroplastic 62 212 - -
Pral5841g00007 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 223 301 IPR000504 GO:0003723
Pral5841g00007 308 PANTHER OS02G0815200 PROTEIN 17 303 - -
Pral5841g00007 308 CDD RRM2_NsCP33_like 224 299 - -
Pral5841g00007 308 FunFam 31 kDa ribonucleoprotein, chloroplastic 213 307 - -
Pral5841g00007 308 SUPERFAMILY RNA-binding domain, RBD 215 306 IPR035979 GO:0003676
Pral5841g00007 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 131 200 IPR000504 GO:0003723
Pral5841g00007 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 226 295 IPR000504 GO:0003723
Pral5841g00007 308 SMART rrm1_1 224 297 IPR000504 GO:0003723
Pral5841g00007 308 SMART rrm1_1 130 203 IPR000504 GO:0003723
Pral5841g00007 308 SUPERFAMILY RNA-binding domain, RBD 125 217 IPR035979 GO:0003676
Pral5841g00007 308 MobiDBLite consensus disorder prediction 98 118 - -
Pral5841g00007 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 129 207 IPR000504 GO:0003723
Pral5841g00007 308 MobiDBLite consensus disorder prediction 101 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5841g00007 Pral-Chr5841 39517 41935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5841g00007 127 305 Eukaryotic Initiation Factors Gene Family AT3G16380 34.574 3.47e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5841g00007 - - qsa:O6P43_030799 414.075