Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5841g00002 ATGCCGAGTTTTGTGACAGGTTTCATGGTGCAAGACAGCACTTCCTGCTGGTTGCTCCTTATCTTACCCATCTCCCTCATTGTGATATTCAAATGGTATTCCAATTCTGCAGTCAACAAAACCTCTCTCCCTTCTCCCCCAAAATTGCCAGTGATAGGAAATCTCCATCAACTAGGTTTGTACCCTCATCGTACCCTCCATTCTCTGGCTCAGAAGTATGGCCCCTTGATGCGTCTTCATTTTGGGAAAAAACCAGTACTCGTAGTCTCTTCTGCAGAAGCTGCTCGTGAGGTGATGAAGACCCATGATCTCGTATTTTCAAGCAGGCCTAAGCTTAAAATGTTCGATATGCTATTATATGGCAAGGACGTTGCATCAGCTCCATATGGAGAATACTGGAGGCAGTTAAGAAGCATCTGCGTGTTGCATCTTCTGAGTAACAAAAGGGTTCAATCCCTTCGCGGTGTGAGAGAGGAAGAAACTTCCGTAATGATGGAAAAGATCACGCACGCTTGTTCTGCTAACACATCAGTGAACTTGAGCGAGTTATTTTCATCGGTTACGAACGATGTGATTTGCAGGGCGGCTTTGGGCAGGAAATATGGAGAGGGGCGTGGGAGAAAATTTATGGAGTTACTCGAGAAGTTTGTAGAGCTGGTGGGTTCTTTTGTGATAGGGGACTATATACCCTGGCTTGATTGGGTTGGTCATGTGAGTGGCTTGTATGGTAAAGCGCACGCAGTGGCTGCAGAGTTTGATCGATTTTTGGAGGAAGTAATTGAGGAGCACGAGGCGAATCGTCCAAAAGAAGGCGATGATGATTTTGTGGACGTTTTGCTTTCGGTCCAAAGCACTAACTCCATTGGCTTTCCCATTGACAGGTCTGCCATAAAGGCCTTGATCTTGGACATGTTTGCTGCGGGCACAGATACCACATACACAGTCTTAGAATGGACGATGGCAGAATTGTTAAGACATCCAAATGTTATGAAAAAGCTACAAGACGAGGTTAGAAATGTAAAAGGAGACAAATCACACACACTAACAGAGGAGGATATAGATCACATGCCTTACCTAAGGGCAGTGTTAAAAGAAACACTTCGATTACACCCTCCAATTCCTTTACTAGTCCCTCGAGAAAGCATGCAAGAAATAAAACTACTTGGTCATCACATTGGTGCTAAGACGCATGTAATTGTGAATGCTTGGGCAATAGCAAGAGATCCTGTGCATTGGGACAATCCTCAAGAATTCAAGCCGGAGAGGTTCTTGAACAGCTCAATAGATTATAAAGGACTTGATTTTCAATTGATCCCATTTGGAGCAGGAAGAAGGGGGTGTCCTGGAACACAACTTGCGATGGCCTTGAACGAGCTTGTGATAGCAAACGTTTTGTACCGTTTTGATTGGTCTTTGCCAAAAGGAGAACAGGGGAAGGACTTGGACATGTGTGAAACAGTTGGGCTTACTGCGCATAAAAAGATGCCTCTTCTGGGAATTGCGTTGCCGCGCAACAAGTGA 1521 0.449 MPSFVTGFMVQDSTSCWLLLILPISLIVIFKWYSNSAVNKTSLPSPPKLPVIGNLHQLGLYPHRTLHSLAQKYGPLMRLHFGKKPVLVVSSAEAAREVMKTHDLVFSSRPKLKMFDMLLYGKDVASAPYGEYWRQLRSICVLHLLSNKRVQSLRGVREEETSVMMEKITHACSANTSVNLSELFSSVTNDVICRAALGRKYGEGRGRKFMELLEKFVELVGSFVIGDYIPWLDWVGHVSGLYGKAHAVAAEFDRFLEEVIEEHEANRPKEGDDDFVDVLLSVQSTNSIGFPIDRSAIKALILDMFAAGTDTTYTVLEWTMAELLRHPNVMKKLQDEVRNVKGDKSHTLTEEDIDHMPYLRAVLKETLRLHPPIPLLVPRESMQEIKLLGHHIGAKTHVIVNAWAIARDPVHWDNPQEFKPERFLNSSIDYKGLDFQLIPFGAGRRGCPGTQLAMALNELVIANVLYRFDWSLPKGEQGKDLDMCETVGLTAHKKMPLLGIALPRNK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5841g00002 506 CDD CYP71-like 72 497 - -
Pral5841g00002 506 FunFam Cytochrome P450 83B1 29 500 - -
Pral5841g00002 506 Pfam Cytochrome P450 44 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 Gene3D Cytochrome P450 29 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 PANTHER CYTOCHROME P450 71B11-RELATED 37 501 - -
Pral5841g00002 506 SUPERFAMILY Cytochrome P450 44 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5841g00002 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5841g00002 Pral-Chr5841 5303 7527 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5841g00002 39 501 Cytochrome P450 AT3G48270 54.077 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5841g00002 - - pvy:116108609 620.157