Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5840g00024 ATGGCGCAAGACAACACTTCCTGGTTGCTCCTTATCTTACCCATCTTCCTCATTCTACTATTCAAATGGTATTCCAAGTCTGCAATCAGCAAAAGCTCACTCCCTTCTCCACCAAAATTGCCAGTGATAGGAAATCTCCATCAATTAGGTTTGTACCCTCATCGTACCCTCCATTCTCTGGCTCAGAAGTATGGCCCCTTGATGCTTCTTCATCTTGGGAGAAAACCAGTACTTGCAGTCTCTTCTGCAGAAGCTGCTCGCGAGGTGATGAAAACCCATGATCTAGTGTTTTCAAACAGGCCTAAGCTTAAAATGTTCGATATGCTATTATATGGCAAGGACGTTGCATCAGCTCCATGTGGAGAATACTGGAGGCAGTTAAGAAGCATCTGCGTGTTGCATCTTCTGAGTAACAAAATGGTTCAATCCCTTCGCGGTGTGAGAGAGGAAGAAACTTCCATAATGATGGAAAAGATCAAGCACGCTTGTTCTGCTAACAGATCAGTGAACTTGAGCGAGTTATTTTCATCGATTGCGAACGATGTGGTTTGCAGCAGGGTGGCTTTGGGCAGGAAATATGGCGAGGGAAGTGGGAGAAAATTTACGGAGTTACGAGACAACTTTGGAGAGCTAATGGGTTCTTCTGTGATAGGGGACTATATACCTTGGCTTGATTGGCTTGGTCATGTGAATGGCTTTTACGCTAGAGCACATGCAGTGGCTGAAGAGTTTGATCGATTTCTGGAGGCAGTAGTTGAGGGGCACATGAATCGTCCAAAAGAAGCCTATGATTCTACTGAAGGCGATGATGATTTTGTGGACCTTTTGCTTTCGCTTCAAAGGACAAACTCCATTGGCTTTCCCATTGACAGATCTGCCATGAAGGCTGTGATCTTGGATATGTTTGCTGCAGGTACAGATACCACACACACAGTCTTAGGATGGACAATGACAGAATTGTTAAAACATCCAAATGCTATGAAGAAACTACAAGACGAGGTTAAAAATGTGAAGAGAGACAGATCACACATAATAACAGAGGAGGATACAGATCACATGCCCTACCTAAAGGCAGTGTTGAAAGAAACACTTCGCTTACACCCTCCAGTTCCTTTACTAATGCCTCGAGAAAGCATGCAAGAAATAAAACTACTTGGCCATCACATTGATACTAAGACTCAAGTAGCTGTGAATGCTTGGGCAGCAGCAAGAGATCCTGTGCATTGGAACACTCCTCAACAATTCAAGCCAGAGAGGTTCTTGAACAGTTCAATAGATTATAAAGGACTTGATTTTCAATTGATCCCATTTGGAGCAGGAAGAAGGGGGTGTCCTGGAACACAACTTGCAATGGCGTTGAACGAGCTCGTGATAGCAAACGTTGTGTTCCATTTTGATTGGTCTTTGCCAAACGGAGAACAAGGGAAGGACTTGGACATGTCTGAAACAGCTGGGCTCACTGTGCATAAAAGGGTACCTCTTCAGGTAGTTGCGTTGCCACGTAACAAGTGA 1512 0.4425 MAQDNTSWLLLILPIFLILLFKWYSKSAISKSSLPSPPKLPVIGNLHQLGLYPHRTLHSLAQKYGPLMLLHLGRKPVLAVSSAEAAREVMKTHDLVFSNRPKLKMFDMLLYGKDVASAPCGEYWRQLRSICVLHLLSNKMVQSLRGVREEETSIMMEKIKHACSANRSVNLSELFSSIANDVVCSRVALGRKYGEGSGRKFTELRDNFGELMGSSVIGDYIPWLDWLGHVNGFYARAHAVAEEFDRFLEAVVEGHMNRPKEAYDSTEGDDDFVDLLLSLQRTNSIGFPIDRSAMKAVILDMFAAGTDTTHTVLGWTMTELLKHPNAMKKLQDEVKNVKRDRSHIITEEDTDHMPYLKAVLKETLRLHPPVPLLMPRESMQEIKLLGHHIDTKTQVAVNAWAAARDPVHWNTPQQFKPERFLNSSIDYKGLDFQLIPFGAGRRGCPGTQLAMALNELVIANVVFHFDWSLPNGEQGKDLDMSETAGLTVHKRVPLQVVALPRNK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5840g00024 503 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 SUPERFAMILY Cytochrome P450 35 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PANTHER CYTOCHROME P450 71B11-RELATED 20 499 - -
Pral5840g00024 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Pral5840g00024 503 CDD CYP71-like 63 494 - -
Pral5840g00024 503 Coils Coil 327 347 - -
Pral5840g00024 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00024 503 FunFam Cytochrome P450 83B1 21 497 - -
Pral5840g00024 503 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5840g00024 Pral-Chr5840 126155 127824 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5840g00024 26 498 Cytochrome P450 AT3G48270 50.526 6.32e-177 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5840g00024 - - jre:108998521 584.334