Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5840g00021 ATGCCGAGTTTTGTGACAGGTTTCATGGTGCAAGACAGCACTTCCTGCTGGTTGCTCCTTATCTTACCCATCTTCCTCATTGTGATATTTAAATGGTATTCCAATTCTGCAGTCAACAAAACCTCTCTCCCTTCTCCACCAAAATTTCCAGTGATAGGAAATCTCCATCAACTAGGTTTGTACCCTCATCGCACCTTCCATTCTCTGGCTCAGAAGTATGGTCCCTTGATGCTTCTTCATTTTGGTAAAAAACCAGTACTCGTAGTCTCTTCCGCAGAAGCTGCTCGCGAGGTGATGAAAACCCATGATCTCGTATTTTCAAGCAGGCCCAAACTTAAAATGTTTGATATCCTCTTATATGGCAATAAGGACATTGCCTCAGCCCCATATGGAGAATACTGGAGGCAGTTAAGAAGCATCTGCGTGTTGCATCTTCTGAGTAACAAAAGGGTTCGATCCCTTCGCGGTGTGAGAGAGGAAGAAACTTCCATAATGATGGAAAAGATCAACCACGCTTGTTCTGCTAACAGATCAGTGAACTTGAGCGAGTTATTTTCATCGGTTACGAACGATGTGATTTGCAGGGCGGCTTTGGGCAGGAAATATGGAGAGGGGAGTGGGAGAAAATTTATGGAGTTATTAGCGAAGTTTGCAGAGCTGCTGGGTTCTGTTGTGATGGGGGACTATATACCCTGGCTTGATTGGGTTGGTCATGTGAGTGGCTTGTACGGTAAAGCCTACGCAGTGGCTGAAGAGTTTGATCGATTTTTGGAGGAAGTAATTGAGGAGCACGATACGAATCGTCCAAAAGAAGGCGATGGTGATTTTGTGGACGTTTTGCTTTCCGTTCAAAGGACTAACTCCATGGGCTTTCCCATCGACAGGTCTGCCATAAAGGCTTCGATCTTGGACATGTTTTTTGCGGGTACAGATACCACATACACAGTCTTAGATTGGACAATGGCAGAATTGTTAAGACATCCAAATGTTATGAAAAAGTTACAAGATGAGGCTAGAAATGTGAAAGGAGACAAATCACACATAATAACAGAGGAGGATACAGATCACATGCCCTACCTAAGGGCAGTGTTGAAAGAAACACTTCGCCTGCACCCTCCAGTTCCTTTACTACCCCCTCGAGAAAGCATGCAAGAAATAAAACTACTTGGCCATCACATTGGTGCTAAGACGCATGTAATTGTGAATGCTTGGGGGATAGCAAGAGATCCTGTGCATTGGGACAATCCTCAAGAATTCAAGCCAGAGAGGTTCTTGAACAGTTCAATAGATTATAAAGGACTTGATTTTCAATTGATCCCATTTGGAGCAGGAAGAAGGGGGTGTCCTGGAACACAACTTGCAATGGCGTTGAACGAGCTTGTGATAGCAAACGTTGTGTTCCACTTTGATTGGTCTTTGCCAAACGGAGAACAAGGGAAGGACTTGGACATGTCTGAAGCAGTTGGGCTTACTGTGCATAAAAAGATACCTCTTCTGGGAGTTGCGTTGCCGTGCAACAAGTGA 1524 0.4449 MPSFVTGFMVQDSTSCWLLLILPIFLIVIFKWYSNSAVNKTSLPSPPKFPVIGNLHQLGLYPHRTFHSLAQKYGPLMLLHFGKKPVLVVSSAEAAREVMKTHDLVFSSRPKLKMFDILLYGNKDIASAPYGEYWRQLRSICVLHLLSNKRVRSLRGVREEETSIMMEKINHACSANRSVNLSELFSSVTNDVICRAALGRKYGEGSGRKFMELLAKFAELLGSVVMGDYIPWLDWVGHVSGLYGKAYAVAEEFDRFLEEVIEEHDTNRPKEGDGDFVDVLLSVQRTNSMGFPIDRSAIKASILDMFFAGTDTTYTVLDWTMAELLRHPNVMKKLQDEARNVKGDKSHIITEEDTDHMPYLRAVLKETLRLHPPVPLLPPRESMQEIKLLGHHIGAKTHVIVNAWGIARDPVHWDNPQEFKPERFLNSSIDYKGLDFQLIPFGAGRRGCPGTQLAMALNELVIANVVFHFDWSLPNGEQGKDLDMSEAVGLTVHKKIPLLGVALPCNK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5840g00021 507 CDD CYP71-like 72 498 - -
Pral5840g00021 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Pral5840g00021 507 Pfam Cytochrome P450 44 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 Gene3D Cytochrome P450 29 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 FunFam Cytochrome P450 83B1 29 501 - -
Pral5840g00021 507 PANTHER CYTOCHROME P450 71B11-RELATED 28 502 - -
Pral5840g00021 507 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral5840g00021 507 SUPERFAMILY Cytochrome P450 44 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5840g00021 Pral-Chr5840 100170 102361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5840g00021 39 502 Cytochrome P450 AT3G48270 52.575 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5840g00021 - - gmx:100819183 610.912