Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5840g00010 ATGCTGCAGGATTCGTCCCAACGAGACTTTGATAGCTCTGACTCTGAATTTGTAGAGGTTGATCCCACCGGTCGTTATGTTCGGTACAAGGAAGTTTTAGGGAAGGGAGCTTTCAAGGAAGTATATCGAGCTTTCGATGAGTTGGAAGGAATTGAGGTTGCATGGAATCAAGTTAAAGTGGATGAACGAATGCATAATTCTGAAGATTTGGAACGCCTGTATTCAGAAGTTCATCTGCTGAAGACTTTAAAGCATAAAAATATCATCACATTTTATAATTCATGGGTTGATCCTGAGCATGGCAACATCAACTTCATCACTGAAATATTTACTTCAGGAACATTACGCCAATACAGGAAGAAACACAAGCGTGTTGACTTGAAAGCCTTAAAGAAATGGTCTAGGCAGATTTTGGAGGGGCTTTTCTATCTTCACAGTCATGATCCACCAATTATTCATCGAGATCTTAAGTGTGACAACATCTTTGTCAATGGAAATCAAGGTGAGGTGAAAATTGGTGACCTGGGACTGGCAGCCATTCTTCAACAAGCCAATTCAGCTCATAGTGTCATAGGTACTCCAGAGTTTATGGCCCCAGAGCTCTATGAAGAGGAATACAATGAGCTTGTTGACATTTATGCTTTTGGCATGTGCTTGCTAGAATTGGTAACCTTTGAGTACCCATATGTTGAATGTGCAAATGCCGCTCAAATATACAAAAAGGTGACATCTGGAGTAAAGCCGGCATCTTTGGCAAAAGTGACAGATCCTAGGGTGAAAGCATTTATAGGGAAGTGTATTGCCCATGTATCTGAACGATTACCGGCTAAGGATCTCTTGATGGATTCCTTTCTTCATTTAGACGAAGATACTGAGGGTATAAGTCGTTTTTTATGGCCTAAAACTCACCATGCTGAGACAAGCAGGGAATTTAGAGTGGAAGGTCAACGGAAAGATGTCAATACAATATTTCTGAAACTGAGACTAGTAGACTTGTCAGGTCGTATTTGCAATATCCACTTTCCTTTTAATATTGAGGCAGACACTGCAGTTGGGGTTGCTGGCGAAATGGTTGAAGAGCTTGAGCTCTCTGATCAAGATGTCACAACTATTGCTGAGATGATTGAGTCAGAAATTCAAAACCACTTTCCAGTTTGGAATCCCAGTGAAAGTCCCATCCATGGATCTGGCAAAGGGCCGGCAGTTTCAAGCGGATTTGCCTCTACCAACTTTACTGATAGTCTTGCACTGGATATATTACCCTCTGGCCGTAAGTTCTGGTCGGACTCACCCAAGGGAGCAGTCAAAAACTCTTTTTTAAGGGCCGATGCTTCTAACCTGTCCTGTAAAGTGGATGTGGGCACCGAGGAAAGTAACTTGACTGGAAATGATGCTGTCTCAGTTCATCAGCAGGCTAAGAACTGTGTTCATGATGGTGATAGGAGTTCAGTAAAGAAACCTAGTGGGATTGCTGATTTTCATTCCATTGAGAGAAGGATAGCATCCAAGGATTCAAAAGTAACGGAAGGGGAATCTCCTCCAGAAGCAAAATCTAGCATATTAGGAGATTCTGAATTAGAAAATGTCAACTTAATTGCCTCAGAACTAAAAAAATTGTTGGTGACACAGCAAGAAGACTTAAAAAAACTAGAGAAGAAACATGAATTAGCCGTCTCAGATTTTCTGAAGAAGCTCCCTTCTGAGGTGCGGCAGCTGATTTTAAATGCATATAGCCTGGAGTTACCTGACAGTGCAGATGCAGACAGACTTGAGGCCTCTTCCAATGCTTAA 1791 0.4176 MLQDSSQRDFDSSDSEFVEVDPTGRYVRYKEVLGKGAFKEVYRAFDELEGIEVAWNQVKVDERMHNSEDLERLYSEVHLLKTLKHKNIITFYNSWVDPEHGNINFITEIFTSGTLRQYRKKHKRVDLKALKKWSRQILEGLFYLHSHDPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECANAAQIYKKVTSGVKPASLAKVTDPRVKAFIGKCIAHVSERLPAKDLLMDSFLHLDEDTEGISRFLWPKTHHAETSREFRVEGQRKDVNTIFLKLRLVDLSGRICNIHFPFNIEADTAVGVAGEMVEELELSDQDVTTIAEMIESEIQNHFPVWNPSESPIHGSGKGPAVSSGFASTNFTDSLALDILPSGRKFWSDSPKGAVKNSFLRADASNLSCKVDVGTEESNLTGNDAVSVHQQAKNCVHDGDRSSVKKPSGIADFHSIERRIASKDSKVTEGESPPEAKSSILGDSELENVNLIASELKKLLVTQQEDLKKLEKKHELAVSDFLKKLPSEVRQLILNAYSLELPDSADADRLEASSNA 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5840g00010 596 Gene3D - 321 388 - -
Pral5840g00010 596 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5840g00010 596 Coils Coil 533 560 - -
Pral5840g00010 596 SUPERFAMILY Protein kinase-like (PK-like) 29 286 IPR011009 -
Pral5840g00010 596 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral5840g00010 596 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 498 - -
Pral5840g00010 596 Gene3D Transferase(Phosphotransferase) domain 1 110 290 - -
Pral5840g00010 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Pral5840g00010 596 CDD STKc_WNK 25 285 - -
Pral5840g00010 596 FunFam probable serine/threonine-protein kinase WNK9 110 290 - -
Pral5840g00010 596 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Pral5840g00010 596 FunFam Probable serine/threonine-protein kinase WNK1 12 108 - -
Pral5840g00010 596 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 338 379 IPR024678 GO:0004674|GO:0005524
Pral5840g00010 596 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5840g00010 Pral-Chr5840 71864 75016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5840g00010 102 438 MAP Kinase Kinase Kinase AT3G48260 66.667 2.46e-155 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral5840g00010 Pkinase 7.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5840g00010 K08867 - qsa:O6P43_030822 709.523