Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5840g00002 ATGGAGTTCAAAACCAGAAATCAAGAACGATCCACAATCAAGTTCCTCTGTAGCTATGGCGGCAGGATTCTTCCTCGGGCCACAGATGGCAAGCTCCGCTACGTCGGCGGCCACACGAGAGTCCTTGCCGTCGATCCCTCTATTGCTTTTTCAGAGCTGAAGGCCAAGCTTGAAGAATTGTCTGGTTCGTCAGTGACGTTGAGGTGCCCATTGCCCAACGGAGACTTGGAGACGTTGATTTCGATTACCAACGATGAAGATCTGGCCCATATAATTGAGGAGTATGATCGAGCTTCGTCGTCGTTGGCTCATCCGCTGAAGATCAGAGCCATTCTTTCGCCGCCGAAATCACCCAAGAAAATATCTCCTCCTTCGTCTTCTTCTTCTAGCGCGAATCAATCTCCGTCCAGATCTCTCCACAACTCCATCGAGTCCTTGCCTTATTCGCTGGCCTATCGCTTTATCTGTCACAACTGCGCACCGCCGGTTGGATATCCAATCGGTGTCCGTAGCGGGAGCCCTAGGTTTTCATACGGTGGCTCCTACTGCGGCAATTACTGTCACTGA 567 0.5132 MEFKTRNQERSTIKFLCSYGGRILPRATDGKLRYVGGHTRVLAVDPSIAFSELKAKLEELSGSSVTLRCPLPNGDLETLISITNDEDLAHIIEEYDRASSSLAHPLKIRAILSPPKSPKKISPPSSSSSSANQSPSRSLHNSIESLPYSLAYRFICHNCAPPVGYPIGVRSGSPRFSYGGSYCGNYCH 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5840g00002 188 SMART PB1_new 27 115 IPR000270 GO:0005515
Pral5840g00002 188 PANTHER OS05G0427100 PROTEIN-RELATED 6 142 - -
Pral5840g00002 188 MobiDBLite consensus disorder prediction 122 138 - -
Pral5840g00002 188 Pfam PB1 domain 28 99 IPR000270 GO:0005515
Pral5840g00002 188 MobiDBLite consensus disorder prediction 113 138 - -
Pral5840g00002 188 CDD PB1_UP2 16 112 - -
Pral5840g00002 188 SUPERFAMILY CAD & PB1 domains 29 122 - -
Pral5840g00002 188 Gene3D - 31 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5840g00002 Pral-Chr5840 22414 23242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5840g00002 7 100 MAP Kinase Kinase Kinase AT5G57610 46.809 2.21e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5840g00002 - - gmx:100797123 204.912