Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral583g00002 ATGTTAGACTTGTCCAACAATCATTTCAAAGGACCTATTCCTTCCAACATATTCAACATTTCAACATTAACATTTTTAAACCTTGGTGGCAACTCCCTCTCTGGCCTTCTCCCATCATATTTAGGAAATGGCCTTCCCAATTTGAAGAAATTATGGTTGTATGGGAATGAACTAACTGGACAAATTCCAAATAGCATATCAAATGCTTCTAAGCTCATTGCTTTAGACTTGTCATCAAATAAACTTACCAAAGCTATCCCAAATGTAGTTGGAAATTTAACAAGCTTGATTGACTTAGCTTTGGATGGGAATGAATTGGCAGGTTTGATTACATATACATTTGACAAATTACATAGCCTTCAACGTTTAAGTCTCAGCAGCAACAAATTACAAGGATCCATTATAAATGAGCTTTGCCAACTCAAAAGTCTAAGTGAGTTGAATCTTGCCAACAACATGTTTTCAGGAGCAATTCCGGAATGTCTTGGGAATACTTCTTTGCAAAAGTTGAATTTTAGCTCTAACAAATTTTTTTCCCATATACCCTCTTCTCTTTGGAGTCTCAAAGATATATTGGTTTTAGACATATCCTCCAGTGCATTGAGTGGAATAATTTCACCAGAGGTATCAAAATTGAGAGCAATTACACTATTAAATTTGTCAAGAAACCAAATTTCAGGAAGCATCCCTACAACTATGGGCAGGTTGCAGGCTTTGCAAAACCTATCTTTAGCTCACAACAAATTACAAGGGCCTATGCCTGAATCGCTAAGTGGCATGATAAGTATTGAGTCAATAGATTTTTCTCATAATTATTTGTCTGGTGTGATTCCAAAGTCCTTAGAGTCACTGCACTATCTTAAATCTATTAATCTTTCTTATAATTTATTGGAAGGAGAAATTCCAAATGGTGGTCCTTTTCAAAATTTTACTGCTCAATCTTTCATAATGAATAAAGACCTTTGCGGAAAATCCCAGCTACAAGTCCAACCATGTAGGAGAGGAAACAAGCAAAGAACAAATAAAGTGATGCTGGTGATAAAATGCTTAGTGCCTATAATGGTTGTCATTTTGGTTATTACATGCATTGTCTTTCTAAAGCATAACAAAGATGATGCTAAATATACAACCAAAAAGGACTTAACAAATTTTGATGCACCAACTAGGATATCCTATTATGAGCTTCTACAGGGAACGAATAGATTTGATGAGGGGAATCTTCTTGGCTCTGGAAGTTTTGGATCAGTATACAAAGTAATTCTTCCAAATGAAAAGATAGTTGCTGTCAAAGTATTTAACATAGACATGGAAGAAGCATTGAGAAGTTTTGATATTGAATGTGTTGCCATGTGCAATTTACGCCATCGCAATCTCATTAAGATCATTAGTAGTTGCTCAAATGATGATTTCAAGTCTTTAATCATGGAATTCATGTCAAATGGAAGTCTTGATAGATGGTTGTACTCTCATAACTATTGTCTAGATATCTTGCAAAGGTTGAATATAATGGTTGATGTGGCAGCTGCATTAGAGTATCTTCATCATGGTACTCCTACTCCCATTGTTCATTGTGACATAAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATAGCTAAACTATTAGGTGAAGGACAATTGGAAACTTATACAAAAACATTGGCTACAGTTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGTGGTTTCTTTCAAAGGAGATGTGTATAGCTATGGTATCATGCTCATGGAGATGTTTACAAGGAAGAAGCCAACTGACGAAATGTTTATTGAAGATCTTTGTTTGAAAGATTGGGTTAGCAAGTCAATACCACATTCAATCATTGATATTTTAGATATCAACTTGCTGTGCAAAGGGAATCCAAATATTAGCAGTATATTACAGCATATATCATCAATTTTTGAGTTAGCATTAAGTTGTTGTGTTGAACTACCTGAAGCACGAATTATGATGACTGATGTTGTGGTCTCATTGAAAAAGATAAGGTCATATTTACATAAAATGTTAGAGAGGCATCACTAG 2070 0.3507 MLDLSNNHFKGPIPSNIFNISTLTFLNLGGNSLSGLLPSYLGNGLPNLKKLWLYGNELTGQIPNSISNASKLIALDLSSNKLTKAIPNVVGNLTSLIDLALDGNELAGLITYTFDKLHSLQRLSLSSNKLQGSIINELCQLKSLSELNLANNMFSGAIPECLGNTSLQKLNFSSNKFFSHIPSSLWSLKDILVLDISSSALSGIISPEVSKLRAITLLNLSRNQISGSIPTTMGRLQALQNLSLAHNKLQGPMPESLSGMISIESIDFSHNYLSGVIPKSLESLHYLKSINLSYNLLEGEIPNGGPFQNFTAQSFIMNKDLCGKSQLQVQPCRRGNKQRTNKVMLVIKCLVPIMVVILVITCIVFLKHNKDDAKYTTKKDLTNFDAPTRISYYELLQGTNRFDEGNLLGSGSFGSVYKVILPNEKIVAVKVFNIDMEEALRSFDIECVAMCNLRHRNLIKIISSCSNDDFKSLIMEFMSNGSLDRWLYSHNYCLDILQRLNIMVDVAAALEYLHHGTPTPIVHCDIKPSNVLLDEDMVAHLSDFGIAKLLGEGQLETYTKTLATVGYMAPEYGSKGVVSFKGDVYSYGIMLMEMFTRKKPTDEMFIEDLCLKDWVSKSIPHSIIDILDINLLCKGNPNISSILQHISSIFELALSCCVELPEARIMMTDVVVSLKKIRSYLHKMLERHH 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral583g00002 689 FunFam Serine-threonine protein kinase plant-type 382 477 - -
Pral583g00002 689 ProSiteProfiles Protein kinase domain profile. 402 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral583g00002 689 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 478 687 - -
Pral583g00002 689 PANTHER OS04G0122200 PROTEIN 2 88 - -
Pral583g00002 689 Gene3D Transferase(Phosphotransferase) domain 1 478 688 - -
Pral583g00002 689 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 85 - -
Pral583g00002 689 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 86 336 - -
Pral583g00002 689 ProSitePatterns Protein kinases ATP-binding region signature. 408 430 IPR017441 GO:0005524
Pral583g00002 689 Gene3D Phosphorylase Kinase; domain 1 364 477 - -
Pral583g00002 689 SMART LRR_typ_2 236 259 IPR003591 -
Pral583g00002 689 SMART LRR_typ_2 93 116 IPR003591 -
Pral583g00002 689 SMART LRR_typ_2 117 140 IPR003591 -
Pral583g00002 689 SMART LRR_typ_2 165 188 IPR003591 -
Pral583g00002 689 SMART LRR_typ_2 141 164 IPR003591 -
Pral583g00002 689 SMART LRR_typ_2 45 69 IPR003591 -
Pral583g00002 689 SUPERFAMILY Protein kinase-like (PK-like) 382 674 IPR011009 -
Pral583g00002 689 Pfam Leucine Rich Repeat 47 68 IPR001611 GO:0005515
Pral583g00002 689 Pfam Leucine Rich Repeat 23 42 IPR001611 GO:0005515
Pral583g00002 689 Gene3D Ribonuclease Inhibitor 1 333 IPR032675 -
Pral583g00002 689 SMART serkin_6 402 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral583g00002 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Pral583g00002 689 Pfam Protein kinase domain 403 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral583g00002 689 Pfam Leucine rich repeat 238 297 IPR001611 GO:0005515
Pral583g00002 689 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Pral583g00002 689 SUPERFAMILY L domain-like 2 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral583g00002 Pral-Chr583 80816 83062 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral583g00002 2 683 Receptor kinase-like Gene Family AT3G47570 36.878 1.40e-147 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pral583g00002 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral583g00002 - K13420 pcin:129285519 974.541