Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5838g00045 ATGGTGGCTACATCTTGCACAAATTTGCTGGACTTGGTGTCTGGGGACATTTTAAATTTCCCCCAAACACCCAGAGCTCTTTCGCGTGTTAATACTGTTCCTGGAGTTATTTCTGATATAGATGGGAAAAAAGGTACTGATGATGATGATTCACATGCTTCCTCATCAGAACATCGTCAAAAGATAATTATTGTAGCAAATTTTCTTCCCCTTAATGCTCAAAAGGATAAAGATTCAGGCAGGTGGTGCTTTAGTTATGATGAAGATTCAATTTTGTGGCAGCTAAAAGATGCTATTTCTGTTGATACGGATGTTGTTTTTGTGGGATCTTTGAAGGTTGATGTTGATGAAAGTGAGCAAGAGAAAGTTTCCCAAGAGTTGCTAGATGAATTCAAATGCTGGCCTGCCTTCCTTCCACCGCTTATTCAGAATAGGTTTTATAATGGATTTTGCAAGCAACATTTGTGGCCTCTATTTCATTACATGTTACCCATGTTTCCCGATCAAGGCAATCGCTTTGATAGGGTGCTTTGGCAGGCTTATGTTGCTGCTAACAGGATATTTGCAAAAAGGGTTATGGAGGTTATGAATCCAGAAGTTGATTTTGTATGGGTTCATGATTATCATCTGATGGTTCTCCCAACATTTCTCCGGAAAGGATACAGTAAAGTCAAGCTAGGATTTTTCCTCCACAGCCCTTTTCCTTCATCAGAAATTTACCGGACTCTGCCTGTCAGAGACGAAATTTTGAAAGCACTCCTCAATGCAGATTTAATTGGGTTTCACACATTTGATTATGCTCGTCATTTTTTATCTTGTTGTAGTCGAATGCTTGGCTTGGAGTATGAATCCAAAAGGGGCTACATTGGGCTTGAATACTTTGGCCGCACAATATACATTAAGATCTTGCCAGTAGGAATTCATATGGCTAGGCTTCAATCTGCCATAAATCACCCGTCTTCTATTGTCAAAGTTCAAGAACTTTGTGAGCAATTTAAGGGGAAGCAACTTATTCTTGGTGTTGATGATATGGACATCTTTCAAGGAGTCAGTTTGAAGCTCTTGGCTATAGAATTACTCCTAGAGCAGAATCCAGAACTGCAAGGTGAATTAGTATTAGTCCAAATTGTAAATCCCCTGAAAAGTTCAGGCAAAGATGTTGAGGAAGCGAAGAAGGAGATACAGATTATTGCTAACAGGATAAATGAAAGGTTCGGTTTGCTAAATTATGAACCTGTGATCATCATTGATTATCCTGTTCCTTTTTATGAGAAGATAGCCTATTATTCTTTGGCAGAATGTTGCATTGTGAATGCTGTGCGGGATGGTATGAATTTAATTCCATACGAGTATATTGTCTGTAGGCAGGGGAATACGCAAATGGATCAGGCCTTAGGAATTATTTCAGAGTTCCCTCGTACAAGTGCCCTTGTTGTTTCTGAGTTTATAGGTTGCTCGCCATCTCTTAGTGGGGCATTGAGGGTTAATCCCTGGGACATTAGTGCTGTAGCTGATGCAATAAATTTGGCCATCAGTATGTCTATCATAGAGAAACAGTTACGGCATGAGAAGCACTATCGGTATGTTAGCTCTCATGACATGGCTTATTGGGCTCGAAGTTTTGTACAAGATCTAGTTCGTTCATGTCAGGATCACCTCTGCAAACGTTGTTGGGGTATTGGCTTTGGACTGAGTTTCAGAATCCTGGCCCTTTCTCCCAGTTTTAGGAAGCTGTCAATTGGCCACTGTGTCTCTGCATATAAAAGGTCAAATCAGAGAGCAATTTTTTTGGACTATGATGGTACAATTGTGTCCCAGACTTCCATTGTTAAAAGTCCCAGTCCTGAAGTCATGTCTTTGCTAGACAACCTTTGCAGTGACCCCAACAACAATGTGTTTATAGTTAGTGGTAGGGGAAGGGCTTCGTTGGGTGAGTGGTTAAATCAATGTGAGAACCTTGGTATAGCAGCCGAGCACGGTTATTTTACAAGGTGGGATGGACAGTCAAGCTGGGAAACAAATCATATAGCTACAGATTTTGCTTGGAAAAGCATTGTTGAACCCGTGATGAGATCGTATACTGAGGCAACTGATGGCTCTCAAATGGAGATCAAGGAGAGTGCCCTGGTTTGGCACCACCGTGACGCTGATCTTGATTTTGGATCTTGGCAGGCCAAGGCAATGCTGGATCACCTTGAAAATGTCCTTTCAAATGACCCAGTGGTTGTTAGGAAGGGACAGTTCATTGTTGAAGTTAAACCACAGGGAATCACTAAAGGGCTAGTTGTAGAAGAGGTTCTGTCTAGACTGACCCAGAAAGGGAAATCACCGGATTTCATTCTGTGCATTGGGGATGATAGGTCTGACGAGGACATGTTCGAGAGCATATCAACCAAAGTCTACGGAGGAAGCCCCTCTTCAGCACCAGAAATCTTTGCGTGCACAGTTGGCCAGAAACCAAGCAAAGCCAGGTTCTACCTAGACGACACTGCTGAGGTGATGATGTTGCTTAAAAGCCTTGGCACTGCTTCAAGGCTTAAACCAGTATGTGATGAAGAAGGTCATTCTGAAAGAGTAGAGGCTGGTTCTGAAACGGTTGCTTGA 2604 0.4201 MVATSCTNLLDLVSGDILNFPQTPRALSRVNTVPGVISDIDGKKGTDDDDSHASSSEHRQKIIIVANFLPLNAQKDKDSGRWCFSYDEDSILWQLKDAISVDTDVVFVGSLKVDVDESEQEKVSQELLDEFKCWPAFLPPLIQNRFYNGFCKQHLWPLFHYMLPMFPDQGNRFDRVLWQAYVAANRIFAKRVMEVMNPEVDFVWVHDYHLMVLPTFLRKGYSKVKLGFFLHSPFPSSEIYRTLPVRDEILKALLNADLIGFHTFDYARHFLSCCSRMLGLEYESKRGYIGLEYFGRTIYIKILPVGIHMARLQSAINHPSSIVKVQELCEQFKGKQLILGVDDMDIFQGVSLKLLAIELLLEQNPELQGELVLVQIVNPLKSSGKDVEEAKKEIQIIANRINERFGLLNYEPVIIIDYPVPFYEKIAYYSLAECCIVNAVRDGMNLIPYEYIVCRQGNTQMDQALGIISEFPRTSALVVSEFIGCSPSLSGALRVNPWDISAVADAINLAISMSIIEKQLRHEKHYRYVSSHDMAYWARSFVQDLVRSCQDHLCKRCWGIGFGLSFRILALSPSFRKLSIGHCVSAYKRSNQRAIFLDYDGTIVSQTSIVKSPSPEVMSLLDNLCSDPNNNVFIVSGRGRASLGEWLNQCENLGIAAEHGYFTRWDGQSSWETNHIATDFAWKSIVEPVMRSYTEATDGSQMEIKESALVWHHRDADLDFGSWQAKAMLDHLENVLSNDPVVVRKGQFIVEVKPQGITKGLVVEEVLSRLTQKGKSPDFILCIGDDRSDEDMFESISTKVYGGSPSSAPEIFACTVGQKPSKARFYLDDTAEVMMLLKSLGTASRLKPVCDEEGHSERVEAGSETVA 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5838g00045 867 Gene3D Glycogen Phosphorylase B; 315 530 - -
Pral5838g00045 867 MobiDBLite consensus disorder prediction 41 57 - -
Pral5838g00045 867 FunFam Trehalose-6-phosphate synthase 2 676 755 - -
Pral5838g00045 867 Pfam Trehalose-phosphatase 596 830 IPR003337 GO:0003824|GO:0005992
Pral5838g00045 867 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 548 - -
Pral5838g00045 867 MobiDBLite consensus disorder prediction 38 57 - -
Pral5838g00045 867 Gene3D - 595 827 IPR023214 -
Pral5838g00045 867 SUPERFAMILY HAD-like 593 841 IPR036412 -
Pral5838g00045 867 Gene3D Glycogen Phosphorylase B; 52 314 - -
Pral5838g00045 867 FunFam Alpha,alpha-trehalose-phosphate synthase 315 530 - -
Pral5838g00045 867 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 722 853 - -
Pral5838g00045 867 CDD HAD_TPP 594 835 - -
Pral5838g00045 867 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 592 709 - -
Pral5838g00045 867 NCBIfam HAD-IIB family hydrolase 594 798 IPR006379 -
Pral5838g00045 867 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 29 841 IPR001830 GO:0003824|GO:0005992
Pral5838g00045 867 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 313 - -
Pral5838g00045 867 Pfam Glycosyltransferase family 20 61 545 IPR001830 GO:0003824|GO:0005992
Pral5838g00045 867 Gene3D - 675 755 - -
Pral5838g00045 867 CDD GT20_TPS 61 545 IPR001830 GO:0003824|GO:0005992
Pral5838g00045 867 NCBIfam trehalose-phosphatase 591 840 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5838g00045 Pral-Chr5838 208865 214481 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5838g00045 1 866 Trehalose Biosynthesis Gene Families AT1G23870 64.706 0.0 1212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5838g00045 K16055 - qsa:O6P43_022731 1318.91