Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5838g00038 ATGCATGGGCGGGAAGGTGAGGAGAGGAAAAGAACTCGGCACATGTGGACAAGCCCCACTCGTGGCCAACCGATTGTAAGCGCTGCTCTCGATGTTTCTTCTTCATCTTCGCCTTCAGCTAATTCATTCTATAAGGACGGTCGTAAAATTAGTGTTGGTGACTGTGCTCTCTTCAAGCCACCTCAGAAGTGCCCACCTTTTATTGGAATAATTCGTTCATTGACAGTTGGTAAAGAGGGTAAATTGAAGATACTTGTTAATTGGCTTTATCGGTCTGGTGAATTGAACCTTAGCAAAGGTCTCCTACTGGAGACTGCGCTAAACGAAGTTTTCTACTCCTTCCATAAGGATGAGATTCCTGCTGCGTCACTTCTGCATCCTTGTAAAGTTGCATTTCTTCCTAAAGGTGTTGAACTTCCATCAGGGACTCCGTCATTCGTGTGTAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAACTGACCAAGATTATATTAATGTACTTCAAGAAGAAGTAGATCAGCTATTATATAGGACTCGTATAGAAATGCATGCTACAGTGCAAGCAGGTGGTCGATCTCCCAAGCCAATGAGTAGTCCAACATCATCACAGTTAAAATCAGGTTCTGATAGCGTCCAGAATAGTGCTTCTTTTCCTTCTCAAGTCAAGGGCAGGAAAAGGGAGAGGTTGGATCAAGGGCTTGAGTCTGCCAAGCGAGAACGTACAACAAAAGTTGAGGATGGAGACTCTGGTCATTCTAGACAGGAGAACATCTTGAAGACAGAGATTGCAAAAATTACAGAAAAGGGGGGGCTTGTCAATGCTGAAGGGGTTGAGAAGCTTGTGCAGCTTATACATCCTGACAGAAATGTGAAAAAGATAGATTTGGCTAGCCGGTCCATGCTTGCTGCTGTTATTGCAGCGACAGATAAATTGGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGTCGGTGTATGATGAATGGCTTCAAGAGGTCCATAAAGGAAAGATTGGTGATGGAACTGGGTCTAAGGACAGTGATAAGTCTGTTGAAGAATTTCTTTTGGTATTACTTCGGGCACTTGATAAGCTTCCTGTGAATCTTCAAGCCCTACAGACATGTAACATTGGTAAATCTGTGAATCATTTGCGAACTCATAAAAACTCAGAAATCCAGAAGAAAGCTAGGGGATTGGTTGACACATGGAAGAAACGTGTTGAAGCTGAGATGAATATTAATGATGCAAAAGCTGGTTCTAGTCAAACTGTCCCCTGGTCTACAAGAACACGCCTCTCTGAAGTTGGCCAGGGTGGGAATAAAAATTCAGGTGGATCATCTGATGTTGCAGTGAAGAGCTCGGTCACGCAGCTTTCTGCATCCAGAACTTCCTCCGTGAAGATTACCCAGGGAGAGAATGCTGCCAGATCTGCATCTCCTGGGTCTATGAAATCAGTGCCCTCACCAACCTCAGCAACTACAAACTCAAAAGATGGTCAGCCCCGTACTGCTGTTCTCAGTGGAGTTTCTGATCTCCCTATATCAAATGCAAGAGATGAGAAAAGTAGTAGTTCTAGTCAATCTCATAATAACAGTCAATCTTGTTCCAGTGACCATGCTAAAACTGGGGGTTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACTGCTATGAGTGTGAACAAAATATCAGGCAGTTCTTCTCGGCATCGAAAGTCTGTTAATGGAATATCAGGTACAACTTCATCTGGAGGGCACAGGGAGTCTGGTCGAAATTCCTCTGCACACAAAAATTCATCTTCTGAAAAATTGTCACAATCTGGATTAACGGAAAAGGCACATGACGGGGCTTCTGTTGAGGGAAGTGCTCCCAAGCTGATTGTTAAGATTCCAAACCGAGGTCGAAGTCCTGCAGAAAGTGCTAGTGGAGGCTCTTTTGATGATCCTTCAATTATGAACAGTCGAGCTTCATCTCCTGTTTTTTCAGAGAAGAATGATCAATATGATCATAGTTCAAAGGAAAAGATTGATTATTATCGAGCTAGTACTGGTGCAGATATTAATACTGAATCCTGGCAGAGTAATGATTTTAAAGACGTACTAACAGCATCTGATGAAGGCAATGGATCGCCTGCTGCTGTTACTGATGAAGAGCGTTGCAGGACTGTTGGTGATTCTAAGAAGATGGTGGAAGCATCAAAAGCTGCTTCATCATCATCTGGGAATGAAAATAAGGCAGTAAATATTCAGGATGCTTCTTTCAGCTCCATAAATGCTTTGATAGATAGTTGTGTAAAGTATTCTGAAACTAATGCTTCTTTGTCTGCTGTTGATGATGTTGGAATGAAGCTTCTTGCCAGTGTAGCCGCTGGAGAGATTTCCAAATCTGAATTGACAACCCCTGCTGGATCACCAGAAATAAACACCAATGCTGTTGAACAGTCATGTCCAGGTAATGCGATGGAGTGTGAAGGAAAGCTGGTTCAAAGTGAATGTCATGCAAATTGTGGCAATGATGAACATAAGAAGCAGGATACTGTATCTGGTGATTCATGTGGTAATAATGATAATGATTTGGGTCTTTCGGCATCTGAAGTGAAGGTTCCTGAGGAACAAAACAGGCACATTACTTCATCTACTGTGGATTTGCAGCAAGTTACAGAAGCCTGTCCAGAAAGCAAAGAAAAATCAAGTGAAATTCCAGTTGCTGCTTCTGAAAGCACTGTGCTAGAAGCCAGAGTTAGTGAATGTAGCAAACAGCTCAAGGAAAACAAAAATGTTGGGAATGTCAAGGCAGGTGGAAATGTTGATGTTAAAGTTAATGAGGTTGCAAGAGAAGTTGAGATGGACACTAATGACAACTCGACACCCCATCCCTTTGTGGAGGTTGATGTGAAGGGTGATAATTGTACAATTGAGGAATTAAGCAGTGGACAGACAGCTCAAAAGGTTCCTGTGGTTATGCATGATTCAGTGAAAGGAACAGATGAGAATGTGCTACATCCTTCTGATGATAGTGCTGGTAAGGCTGTAGAAGACCACAGTGAAAGAGAATGCAGAAAGACTGTTGATGTGGCTGCTCGAAGTCATGCAGGTCAGTCTGAAATTCGAAGAAATGAGTGTGAAAATGATGTTGTGATAATGCCTGAGAACAGAAGTATAGCTGGTTTAGCTTCAGGCGACACTGGTCTTGCTTCTGAGCATGTGGAGGAGAATTCGGAAACAAAAGAGGCTCATGACCAGCATGCTGGACAGAGTCTGCAGAGAGCTTCACGGAGCTTGCCTTCACAAGAAATGGAGCAGCATCCAGGCTCTAAAGAATCTAAATTGACCGCCATTGAAACAGAGGAAGCTGAAGAGTGCACCTCTGCCACTGCAGATGCCTCTTCCGTGTCTGCTGCTGGCATGTCTGATGTGGTAGATGCAAAAGTTGAGTTTGATTTAAATGAAGGCTTCAGTGCAGATGATGGAAAATCTGGAGAGTTCAATAGCATTCCAGTGCCTGGGTGTGCACCTGCTGTACGAGTGATCAGTCCAGTGCCATTTCCTGCTTCAACCATGTCTAGTGGTATTACTGCTTCAATCACTGTGGCTGCTGCTGCAAAGGGGCCCTTTGTGCCCCCTGAAGACTTGTTGAAAAGTAAAGGGGAGCTTGGTTGGAAGGGATCAGCAGCCACCAGTGCATTCCGACCTGCTGAGCCCAGAAAAATTGCAGAAATGCCTCTTGGTACACCATCGGCAGCTCCTATATCTGATGCCACAGCTGGAAAGCAGAGCCGACAGCTATTAGATATTGACTTAAATGTGCCTGATGAAAGGATGCTTGATGATACAGTTTCTCAAGCGAGTTGTCGTCAGCCAACAGATGGTGTTTCCTCTGCCCGCTGTCCTGGAGGTCTTGGTCTTGACCTAAACCAAGCAGATGAAGCTTCTGATGTGGGTAATTGCTCCACAGGCAATGGCCATAAAATGGATGTACAATTTCTGCAGGTGAAACCATCATCCCATGCTCATCCAAATCATCCAAATAGAGAGGCGAGCGCCCTTAGGGACTTTGATTTGAATGATGGACCTGCAGCTGATGAAGTCATCTCAGAACCGACTTTGTTCACTCACCAAGCCAGAAGCAGTGTACCATCACAGCCCCCTGCATCTGGACCTAGAACAAGTACTACTGAACTGGGAAGTTTCTCATCATGGTTTCCTTCTGCTGGGAACACCTATTCAGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCACCTAATGGGCCGCAAAGAATGCTGGGCCCTGCTACTGGTGGTAGCCCGTTTGGACCTGATGTTTATAGGGCACCAGTGCTGTCATCTTCTGCGATGCCATATCCATCTGCGCCATATCAGTATCCTGTCTTCCCTTTTAATTCTGGCTTTCCTCTTCCATCGTCATCATTTTCAGGTGGATCAACTACTTATGTAGATTCAGCATCTGGTGGAAGGCTTTTCTTTCCTACAGTAAATTCACAGTTAATTGGACCTGCCAGTACAGTTTCATCTCATTACCCCACCAGGCCTTATGTCTTTAGCCTTCCTGATGGTAGTGGTGCTGCTGATGGTAAAAAATGGAGAGGGCAGGGTTTAGACCTTAATGCGGGGCCTGGAGGTCCTGATGTGGAGGGCAGAGATGAGAGCTCAACTCTTTTGCCAAGGCAACTTCCTGTTGCCAGTTCACAGGCCCTAGCTGAGGAGCAGGTGAGGATGTTCCAGCTGGCTGGTGGTGTTCTCAAGAGAAAGGAACCAGATGGTGGATGGGATAGCTACAAGCAATCCTCTTGGCAATAG 4854 0.4471 MHGREGEERKRTRHMWTSPTRGQPIVSAALDVSSSSSPSANSFYKDGRKISVGDCALFKPPQKCPPFIGIIRSLTVGKEGKLKILVNWLYRSGELNLSKGLLLETALNEVFYSFHKDEIPAASLLHPCKVAFLPKGVELPSGTPSFVCRRVYDIANKCLWWLTDQDYINVLQEEVDQLLYRTRIEMHATVQAGGRSPKPMSSPTSSQLKSGSDSVQNSASFPSQVKGRKRERLDQGLESAKRERTTKVEDGDSGHSRQENILKTEIAKITEKGGLVNAEGVEKLVQLIHPDRNVKKIDLASRSMLAAVIAATDKLDCLSQFVQLKGLSVYDEWLQEVHKGKIGDGTGSKDSDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQKKARGLVDTWKKRVEAEMNINDAKAGSSQTVPWSTRTRLSEVGQGGNKNSGGSSDVAVKSSVTQLSASRTSSVKITQGENAARSASPGSMKSVPSPTSATTNSKDGQPRTAVLSGVSDLPISNARDEKSSSSSQSHNNSQSCSSDHAKTGGFSGKEDARSSTAMSVNKISGSSSRHRKSVNGISGTTSSGGHRESGRNSSAHKNSSSEKLSQSGLTEKAHDGASVEGSAPKLIVKIPNRGRSPAESASGGSFDDPSIMNSRASSPVFSEKNDQYDHSSKEKIDYYRASTGADINTESWQSNDFKDVLTASDEGNGSPAAVTDEERCRTVGDSKKMVEASKAASSSSGNENKAVNIQDASFSSINALIDSCVKYSETNASLSAVDDVGMKLLASVAAGEISKSELTTPAGSPEINTNAVEQSCPGNAMECEGKLVQSECHANCGNDEHKKQDTVSGDSCGNNDNDLGLSASEVKVPEEQNRHITSSTVDLQQVTEACPESKEKSSEIPVAASESTVLEARVSECSKQLKENKNVGNVKAGGNVDVKVNEVAREVEMDTNDNSTPHPFVEVDVKGDNCTIEELSSGQTAQKVPVVMHDSVKGTDENVLHPSDDSAGKAVEDHSERECRKTVDVAARSHAGQSEIRRNECENDVVIMPENRSIAGLASGDTGLASEHVEENSETKEAHDQHAGQSLQRASRSLPSQEMEQHPGSKESKLTAIETEEAEECTSATADASSVSAAGMSDVVDAKVEFDLNEGFSADDGKSGEFNSIPVPGCAPAVRVISPVPFPASTMSSGITASITVAAAAKGPFVPPEDLLKSKGELGWKGSAATSAFRPAEPRKIAEMPLGTPSAAPISDATAGKQSRQLLDIDLNVPDERMLDDTVSQASCRQPTDGVSSARCPGGLGLDLNQADEASDVGNCSTGNGHKMDVQFLQVKPSSHAHPNHPNREASALRDFDLNDGPAADEVISEPTLFTHQARSSVPSQPPASGPRTSTTELGSFSSWFPSAGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLGPATGGSPFGPDVYRAPVLSSSAMPYPSAPYQYPVFPFNSGFPLPSSSFSGGSTTYVDSASGGRLFFPTVNSQLIGPASTVSSHYPTRPYVFSLPDGSGAADGKKWRGQGLDLNAGPGGPDVEGRDESSTLLPRQLPVASSQALAEEQVRMFQLAGGVLKRKEPDGGWDSYKQSSWQ 1617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5838g00038 1617 ProSiteProfiles BAH domain profile. 48 163 IPR001025 GO:0003682
Pral5838g00038 1617 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 316 425 IPR035441 -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 195 224 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 552 610 - -
Pral5838g00038 1617 CDD TFIIS_I 336 412 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 998 1020 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 842 861 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 520 545 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 1542 1570 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 437 674 - -
Pral5838g00038 1617 ProSiteProfiles TFIIS N-terminal domain profile. 337 414 IPR017923 -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 1070 1086 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 437 507 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 649 668 - -
Pral5838g00038 1617 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 279 415 IPR035441 -
Pral5838g00038 1617 Gene3D - 34 277 IPR043151 -
Pral5838g00038 1617 Pfam BAH domain 49 156 IPR001025 GO:0003682
Pral5838g00038 1617 Pfam TFIIS helical bundle-like domain 362 411 IPR017923 -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 1243 1262 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 1375 1396 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 225 259 - -
Pral5838g00038 1617 SMART TFS2_5 334 413 IPR003617 GO:0005634
Pral5838g00038 1617 SMART BAH_4 48 163 IPR001025 GO:0003682
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 190 259 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 706 746 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 1087 1104 - -
Pral5838g00038 1617 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1617 - -
Pral5838g00038 1617 MobiDBLite consensus disorder prediction 1067 1111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5838g00038 Pral-Chr5838 161070 168769 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pral5838g00038 BAH 2.3e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5838g00038 - - ccaj:109810746 1991.08