Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral5838g00009 ATGACGATCACTGTTCCCAGCCGACAGCTGTTTGTCGATGGCGAGTGGAAAGAGCCAATCCTCAAGAAACGAATTCCTATCATCAATCCCTCCACTGAACTCAAAATTGGAGATATTCCAGCTGCTACGGCGGAGGATGTGGAGCTTGCAGTGGCTGCTGCTCGGAGAGCCCTGATCAGTAAGAAGGGTAAACATTGGGCAACAGCTTCTGGGTCCGTTCGTGCTCGGTATTTGCGAGCTATCGCTGCTAAGATAATAGAAAGGAAGTCTGAACTGGCAAAACTTGAAGCAATTGATTGTGGAAAACCACTGGATGAAGCATTGTGGGACATGGATGATGTTGCTGGTTGCTTTGAGTACTATGCTGACCTCGCTGACGGATTGGATGCAAAACAAAAGGCTCCCATACCTCTTCCCATGCAAACCTTCAAGAGTCATGTTCTTAGGGAGCCCGTTGGAGTCGTTGCATTGATTACTCCTTGGAACTATCCTCTATTAATGGCTGTGTGGAAAGTTGCTCCTGCCTTGGCTGCTGGTTGTACTGCAATATTGAAGCCATCTGAGTTGGCATCTGTGACCTGTTTGGAGCTGGGTCAGATATGTAGAGATGTGGGCCTTCCTTCAGGTGTCTTGAATATTCTAACTGGATTAGGCCCTGAAGCTGGTGCTTCTTTGGCATCACATCCTCATGTAGACAAGATTGCCTTTACTGGAAGCACTATGACTGGGAGCAAGATTATGTCAACAGCAGCTCAACTGATCAAGCCTGTTTCACTAGAGCTTGGTGGAAAAAGCCCAATTGTTGTTTTCGAGGATGTTGACCTTGATAAAGCTGTTGAATGGACCATGTTTGGCTGCTTCTGGACAAATGGTCAGATTTGCGCTGCCACTACCCGTCTTATTATACATGAAAGCATAGCCGAACAATTTTTGAATAGGCTTGTGAAATGGATTAAAAACATCAAGATATCAGATCCCTTGGAAGAAGGTTGCAGGCTAGGTCCAGTCGTTAGTAAAGGACAGTACGAAAAGGTATTGAAGTTCATCTCAACTGCTAGGAGTGAGGGGGCCACAATTTTGACTGGTGGATCTCGCCCTAGGCATTTAAATAAGGGTTTTTTTATTGAACCAACTGTCGTTACGGATGTAACTACCTCTATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTATGTGTAAAAACATTTAGTACTGAGGAAGAAGCTATTAAACTAGCAAATGACACCCAGTATGGCTTAGCTGCTGCTGTGATATCAAATGACCTAGAAAGATGTGAACGCTTAACAAAGGCTTTTCAGGTGGGAATTGTATGGATCAATTGCTCTCAGCCGTGCTTCACTCAAGCCCCATGGGGAGGCATTAAACGTAGTGGATTTGGTCGTGAATTAGGAGAATGGTATGGCCTTATTTCCTGA 1440 0.4493 MTITVPSRQLFVDGEWKEPILKKRIPIINPSTELKIGDIPAATAEDVELAVAAARRALISKKGKHWATASGSVRARYLRAIAAKIIERKSELAKLEAIDCGKPLDEALWDMDDVAGCFEYYADLADGLDAKQKAPIPLPMQTFKSHVLREPVGVVALITPWNYPLLMAVWKVAPALAAGCTAILKPSELASVTCLELGQICRDVGLPSGVLNILTGLGPEAGASLASHPHVDKIAFTGSTMTGSKIMSTAAQLIKPVSLELGGKSPIVVFEDVDLDKAVEWTMFGCFWTNGQICAATTRLIIHESIAEQFLNRLVKWIKNIKISDPLEEGCRLGPVVSKGQYEKVLKFISTARSEGATILTGGSRPRHLNKGFFIEPTVVTDVTTSMQIWREEVFGPVLCVKTFSTEEEAIKLANDTQYGLAAAVISNDLERCERLTKAFQVGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWYGLIS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral5838g00009 479 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Pral5838g00009 479 CDD ALDH_F10_BADH 27 477 - -
Pral5838g00009 479 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Pral5838g00009 479 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 278 - -
Pral5838g00009 479 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Pral5838g00009 479 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Pral5838g00009 479 PANTHER ALDEHYDE DEHYDROGENASE 5 474 - -
Pral5838g00009 479 Pfam Aldehyde dehydrogenase family 23 475 IPR015590 GO:0016491
Pral5838g00009 479 SUPERFAMILY ALDH-like 5 477 IPR016161 GO:0016491
Pral5838g00009 479 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 474 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral5838g00009 Pral-Chr5838 29338 33987 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral5838g00009 1 474 Aldehyde Dehydrogenase Gene Family AT3G48170 78.481 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral5838g00009 K00130 - qsu:112020174 812.757